| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2662 |
|---|
| Symbol | |
|---|
| ID | 9246513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 3170537 |
|---|
| End bp | 3171667 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, PucR family |
|---|
| Protein accession | YP_003680585 |
|---|
| Protein GI | 297561611 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.384645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.292926 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAAA CAGCGCCGTC GGACGTCATC CCCCGAGCCG CACAGGCGTG CCTGGAGGAG
CTGGAGACCG TCGCCTGGAC CTACGTGCGC AGGGTCCGCG AGCTGACCGG GTACGCCGAG
ACCGTCATCG ACGACGCCGA GCTGTACGGC ACGGCCCGGG CCACGCTCGA ACTCCTCCTG
GAACTCCTGC GGGGACGGGA CCGCCACGGC GAGCTGCGCG CCCACTCGAT CGAGGTCGGA
CGCTCCCGCG CCCGCCGCGG CATCCCCCTG GAGTCGCTGC TGCGGGCCGT GCGCATGGAC
TTCCGCTTCC TCTGGGAGGC GATGCGCGCC CACGTCGCCG AGGCCGACTT CCGCGACTTC
TCCGAGGAGG TCATCTCCAT CTGGGAGGCG GTGGAGGTGC ACACCACCCA CGTGCAGACC
GGCTACACCG ACGAGATCGC CCGGATGCGC GCGGAACTGG AGCTGGAGCA CGCCTTCCTC
CTGCGGCACC TGCTGAGCGG TTCCGGCGGG GACCCGCGCC TGAACGAGCA GGCGGCGCGG
GCGCTGGGCC TGCGCCCCGA CGGCGTCCAC CTCGTCCTGG TGGCCAACGG CAACCACGCC
CGCGACTTCC GGGGCTGGGT CGGCCAGACG TTTCCCCGGG CCGTCCTGCT CCGCCTGGAC
GGGGTGGAGT TCGCCATCGT CCCCGCGGGG GACGCCGCGG GGGCCGCCCG GGAGACGCTG
CTGGGCAAAC CCGTCGGGAT CTCCCCGAGC GCCCACGGCA TCGGGGAGAT AGCCCCCATG
TGGCGGCTCG CCCGCGAGCT GGCGGAGTGG GCGCGGCCCG GCGCGGCGGC CACGGTCGAG
GGCCACTGGA CCCGGCTGGC GGGCGCGCGC CTGGGCCCGG CCGCCGGGGC CTTCGCCCGC
GACGTGCGGG AGGCGCTCGG CGGGTTCACC GAACGCGAGG TCGATCTGCA GGTCGAGACG
GTCGAGGCCT ACTACCGGAC CGGTTCGGTG ACCGAGGTCG CGCAGGCGAT GTTCTGCCAC
CGCAACACGG TGATCAACCG CCTGCGCCGC TTCGCCGAGG CCACCGGGCT CGACGTCACC
AGGCCGGTCG ACGCGTCCGC GGCCCATCTC GCCCTGACCG TCCTGCGCTA G
|
|---|
| Protein sequence | MHKTAPSDVI PRAAQACLEE LETVAWTYVR RVRELTGYAE TVIDDAELYG TARATLELLL
ELLRGRDRHG ELRAHSIEVG RSRARRGIPL ESLLRAVRMD FRFLWEAMRA HVAEADFRDF
SEEVISIWEA VEVHTTHVQT GYTDEIARMR AELELEHAFL LRHLLSGSGG DPRLNEQAAR
ALGLRPDGVH LVLVANGNHA RDFRGWVGQT FPRAVLLRLD GVEFAIVPAG DAAGAARETL
LGKPVGISPS AHGIGEIAPM WRLARELAEW ARPGAAATVE GHWTRLAGAR LGPAAGAFAR
DVREALGGFT EREVDLQVET VEAYYRTGSV TEVAQAMFCH RNTVINRLRR FAEATGLDVT
RPVDASAAHL ALTVLR
|
|---|
| |