Gene Ndas_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1860 
Symbol 
ID9245710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2271917 
End bp2273350 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content71% 
IMG OID 
ProductOmpA/MotB domain protein 
Protein accessionYP_003679794 
Protein GI297560820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.012973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.292926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCACG TCGAACGCTG GGAGGACCGC AGCGTCCTGC GGTTCACGGT GACCCCCCTC 
AACGACCAGG ACGAGGACAG GGAGGACCTG ATCCTGCCCG CCCCCTTCGG CACCGGGGCC
CTCGACCGCC AGCACAGCGC CTTCAACCTC GTCGATCCGC TTGAACAGGC CTTCTACTCG
CCGGTCCGCG ACGAGTCGGG GGAGACCACC ATCGGCAGCG AGGTGGTCCC GCACTGGGTG
ATGGACGCCG ACTACGAGTA CCAGGTGCAC TTTCCCCCGC TGCCCGAGGA CACCGAGCGG
ATCACCCTGG TCGTGAACGG TTCGTTCGGC GAGTTCACCG GTATCCCGGT CATCGACGGC
GAACCCCCGG CGGAACCGCC CGGCGACAGC GTCGACCCGT CCGACATCAA CCCCGGCGAC
ACGGTGGCCG TCCCCCTGCG CGAGGCGGAG ATGACCTCCG AGCCCGAAGA CTACGCCCGC
GACCTGTACA GCATCATCGA GGACTCCTCC CGAACCCGGA CCTCGACCAC CGACGAGGAG
ACCATCGGCC TGCACGCCGA CGTACTGTTC GACTTCGACG AGGCCACCCT CACCCCCGAA
GCCGAGGACG TGCTGGCCGA GGTCGTACAG GAGACCCGGG AGAACGCCGA CCCCTCGCGG
CCGCCCATCC GCGTCGTCGG CCACACCGAC GGCCGGGGCA GCGAAGACTA CAACCAGGAC
CTGTCCGAGC GCCGCGCCCA GGCCGTCCTG GACGTCCTCG AAGAGGGTCT GGGCACCGAG
TACGAGTACG AGACCGAAGG GAGGGGGGCC GAGGAACCCC TCGTCGAGGA GGGCGGCGCC
GACGATGAGG AGGCACGGGC GACCAACCGC CGTGTGGAGA TCTCCTACAA GATCAGGCAG
CCCGGCGACG CCCGGACCGG TACCGAACAG CGGACCGGGT CGCTCGACGG CCGGACCGGC
GCCGCTGCTC CCCCAGCGCC CTTCCGCGCC GAGGACGGTG AGGTGATCGA CACGGCCGAG
GCGGGCCTGG TCCAGGGCAA CGCCGAGTAC GAACTCGGTG TGCGTCCGCT CTACCGGGAC
GGCGCCTACC TCGTCGGGGT CTTCGACATC CGCCACATGG ACACCGGCGG CACGGTCCCG
CCGGTGCTGC GCCCGCTCAA CTCCCGGGAC TACCCGGGCG GGTGGTTCAC CGCGTTCAAC
CTCACCGTCG GCGGGAACGA GGACGTGCGC TACCGGGCCG TGCGCGTGGG CCCCCGGCCG
ACCGAGGACC TGGAGCGCGC CCGGTACCTG TCCACCCCGC AGTGGCCGGT ACAGCCTCTG
GAGACCGGCC ACACCGAACG CGTCTTCGTC TACTTCCCGG CGCCGCCGAC GGAGACGGAC
GCCGTGACGC TCCACGCGGC GGACTTCGGG ACCTTCGAGG TCCCCGTGGA GTAG
 
Protein sequence
MHHVERWEDR SVLRFTVTPL NDQDEDREDL ILPAPFGTGA LDRQHSAFNL VDPLEQAFYS 
PVRDESGETT IGSEVVPHWV MDADYEYQVH FPPLPEDTER ITLVVNGSFG EFTGIPVIDG
EPPAEPPGDS VDPSDINPGD TVAVPLREAE MTSEPEDYAR DLYSIIEDSS RTRTSTTDEE
TIGLHADVLF DFDEATLTPE AEDVLAEVVQ ETRENADPSR PPIRVVGHTD GRGSEDYNQD
LSERRAQAVL DVLEEGLGTE YEYETEGRGA EEPLVEEGGA DDEEARATNR RVEISYKIRQ
PGDARTGTEQ RTGSLDGRTG AAAPPAPFRA EDGEVIDTAE AGLVQGNAEY ELGVRPLYRD
GAYLVGVFDI RHMDTGGTVP PVLRPLNSRD YPGGWFTAFN LTVGGNEDVR YRAVRVGPRP
TEDLERARYL STPQWPVQPL ETGHTERVFV YFPAPPTETD AVTLHAADFG TFEVPVE