| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1780 |
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| Symbol | |
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| ID | 9245630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 2178625 |
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| End bp | 2180091 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | PepSY-associated TM helix domain protein |
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| Protein accession | YP_003679714 |
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| Protein GI | 297560740 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.40116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGG AAGACAGCGC GCCCCCGCAG GACGGGACGC GCGCGGAGCC GGACCGGCGC
GGCACCTGGG CGGCGCTGCG CCCCCTGGTG CTGCGCCTGC ACTTCTACGC GGGGGTCCTC
GTCGCCCCCT TCATCCTGGT CGCCGCCGTG TCGGGGCTGC TGTACGTGTG GACGCCCCAG
ATCGAGCAGG CGGTCTACGC CGAACAGCTG CGGGTGGAGC CCTCCGGCGA ACCGGTCCCG
CTCCACACAC AGGTGCGCGT CGCCCAGGAG GAGCTGCCGG GAGCCGAACT CGACGCGGTG
CGACCGGCCA CCGGCGCGGA GGACTCCACC CGGGTGCTGT TCGACGTGCC GGGGCTGGAG
GCCAGCCACA GGACGACGGT GTTCGTCGAC CCCTACGGCG GCGAGGTGCT CGGGGTGATG
GAGACCTACG GCACCAGCGG CGCCCTCCCG GCCCGCACGT GGGTCGACAC CCTGCACCGC
AGCCTGCACC TGGGCGACGT CGGACGCCTG TACAGCGAGC TCGCGGCGAG CTGGATGTGG
GTGGTCGCCC TGGGCGGTGT CGCCCTGTGG GTCGCGCGCA ACCGGCGTCC GCGCGGCGGT
CTCCGCCGCC TGCTGCTGCC CGGCGCGGGC ACCTCCGGGG GACGGTCCAG GTCGGTCTCG
CTGCACGGAG CCGCCGGTCT GTGGCTTCTG GTGGGCCTGC TGTTCCTGTC GGCGACGGGG
ATGACGTGGT CGCAGTACGC GGGGGCCAAC ATCAGCGACC TGCGCGAGCG GCTGGACTGG
AGCACCCCCG CGGTGTCCAC GGAGGCGCCG GTGGCCTCGC CCGGGGTGGA CGCGGGAGTG
GGCGCCGTCC TGGCCAGTGC GCGCGAGGCG GGCCTGGACG GCCCCGTCGA GGTGGCCCTG
CCCGAGGACC ACACCTCCCC CTACGTGGTG AGCCAGATCG ACCGCGGTTG GCCGACGCGG
GTGGACTCGG CCGCCGTCGC CCCGGATACG GCCGAGGTCA CCGACGTGGT CCGCTTCGCC
GACTACCCGG TCATGGCCAA GCTGAGCCGG TGGGGGATCG ACGCCCACAT GGGTGTGCTG
TTCGGCGTGC CGAACCAGTT GGTGCTGTCC GCCCTGGCCT CGGGGCTGAT CGCCGTCATC
GTGCTGGGCT ACCGCATGTG GTGGCAGCGG CGCCCCACAC GGTCCCGAGT CCTGGGCGTG
GGACGCCCCT ACCCGCGCGG CTCCCTCACG GCCCTGTCCC CGCTGTCCAG GGTCGCGGCG
GTGGCGGTCC TGGCCCTGGT CGGCTGGGCG GCGCCGCTGC TGGGCGCCTC GCTGCTGGTG
TTCCTGGCCG TGGACGCCGT CCTCGGGTGG CGGGCCCGGT CACGTGCCTC AGGGGGCTCC
GCGCCGGGCG GCCGGGCTCC GGGTGCCGAC GGGCAGGCCG GACCCGAGTC CGCGGGCGCG
CCCGCGTCCG GGGCGCGGAA CCTGTGA
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| Protein sequence | MGQEDSAPPQ DGTRAEPDRR GTWAALRPLV LRLHFYAGVL VAPFILVAAV SGLLYVWTPQ
IEQAVYAEQL RVEPSGEPVP LHTQVRVAQE ELPGAELDAV RPATGAEDST RVLFDVPGLE
ASHRTTVFVD PYGGEVLGVM ETYGTSGALP ARTWVDTLHR SLHLGDVGRL YSELAASWMW
VVALGGVALW VARNRRPRGG LRRLLLPGAG TSGGRSRSVS LHGAAGLWLL VGLLFLSATG
MTWSQYAGAN ISDLRERLDW STPAVSTEAP VASPGVDAGV GAVLASAREA GLDGPVEVAL
PEDHTSPYVV SQIDRGWPTR VDSAAVAPDT AEVTDVVRFA DYPVMAKLSR WGIDAHMGVL
FGVPNQLVLS ALASGLIAVI VLGYRMWWQR RPTRSRVLGV GRPYPRGSLT ALSPLSRVAA
VAVLALVGWA APLLGASLLV FLAVDAVLGW RARSRASGGS APGGRAPGAD GQAGPESAGA
PASGARNL
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