| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1591 |
|---|
| Symbol | |
|---|
| ID | 9245441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 1947388 |
|---|
| End bp | 1948392 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_003679526 |
|---|
| Protein GI | 297560552 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0300116 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCCG GTCCGCTGAC CCGCGGCGGC GCGATCGCCG CCGGCGCGCT CTCCCTCCTG
CTGCTCGCCG CCTGCGGCGG CCAGACCTCC GGCTCCGAGG AGGGCGGCTC GGACGGCGAG
GTCGCCGAGG GGTACCCGGT CACCGTCGAG ACCCTCTTCG GCGACGTGGA GATCGCGGAC
AAGCCGACCA ACGTCGTCGC CATGGGCTGG TCCGACGCCG AGACCGCGCT GGCGCTGGGC
GTGCAGCCGG TCGGCGTGGC CGACTGGCAG GCCTACGGCG GCACGGGCGT GGGCCCGTGG
GCGGCCGACA TGTTCGAGGA GGAGCCGGTC CAGCTCGGCA CCATGGAGCC GAACCTGGAG
GCGATCGCCT CCCTGGAGCC CGACGTCATC CTCGACACCC GCTCCGACAA CAGCCAGGAG
CGCTACGACA CGCTCTCTCC GGTGGCCCCC GTGGTCGGCC CGCCGCCCGG GGTGGAGGTC
ACCTACGGCA CCACCTGGCA GCAGCAGACC CGACAGGTCG CCCAGGTGGT CGGCGAGCAG
GAGCGCGCCG AGGAGCTCAT CGAGGAGCTG GAGGGCCGCT TCGCCCGGAT CCGCGAGGAG
AACCCCGAGT TCGCCGACAT GACCCTGACC GTGGGGGCCT ACTTCGACGG CCAGTACGGC
GCCTACGTGC CCGGCGACTC CCGGGTGGAC CTGCTCCAGG AGCTGGGCTT CCAGTACGAG
CCCGAGGTCG AGGAGATGGC CGACGGCGCC TTCTACGTCG ACCTGAGCCC GGAGCGGCTG
GAGGTCCTGG ACGCGGACCT GACGGTCATG TTCCCCATCG GCGGCACGGC GGACCACCTG
CGCGAGGACC CGGTGCTCCA GGGCATCCCC TCCGCCGAGG ACGGCCGACT GGTCATCCTG
GACGACCCGG AGCTGGCCAA CGCCTTCTCC AGCGGTTCGT ACCCGGGCAT CTCCCACGCG
CTGGACGAGC TGGTCCCGCT GCTCCAGGAG ACCCTGAACG GCTGA
|
|---|
| Protein sequence | MNPGPLTRGG AIAAGALSLL LLAACGGQTS GSEEGGSDGE VAEGYPVTVE TLFGDVEIAD
KPTNVVAMGW SDAETALALG VQPVGVADWQ AYGGTGVGPW AADMFEEEPV QLGTMEPNLE
AIASLEPDVI LDTRSDNSQE RYDTLSPVAP VVGPPPGVEV TYGTTWQQQT RQVAQVVGEQ
ERAEELIEEL EGRFARIREE NPEFADMTLT VGAYFDGQYG AYVPGDSRVD LLQELGFQYE
PEVEEMADGA FYVDLSPERL EVLDADLTVM FPIGGTADHL REDPVLQGIP SAEDGRLVIL
DDPELANAFS SGSYPGISHA LDELVPLLQE TLNG
|
|---|
| |