Gene Ndas_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1560 
Symbol 
ID9245410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1910101 
End bp1912479 
Gene Length2379 bp 
Protein Length792 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003679495 
Protein GI297560521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.596723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0176466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG TCCGCGTGGT CACCGACGGT GTGGAGGGGA CCGATCCCGA CCGGCTCCGC 
GCGCTGCTGC CCTCCGGCCT GCTCCTGCTC GTCGCCGCGG GCGCCAACCT CCTGCTGATC
GTCCTGGTCA GCTACGTCGT CCTGCGCACG CTGTTCACCG GGCGGCTGCG CTCCCTGGTC
CGGCCGGTCG CCGCCGGAAT CGCCGCCTAC ACACTCGCCT CGCTGATCAA CGCCACCCTC
TTCGCGCTGA TCGGCCCGGA GCGGTTCCCC GACGCGCTCG CCCCCGACGA CGTGTTCACC
AGCGCCACCC TCGGCTACGT GGCCGCCGTC CTGGCCTTCA TCCGCACCAT GCCCACCGGG
CTGCCGCGGG TCCGCTCGAT CCTGTGGGCG GGCAACACCA CCGTCGCGGT CTGCGCCCTG
CTGGCCGGGG TCACCAGCCT CCTCGCCCTC GTCCTGACCG TCCTGGTCGG CCTCACCTGC
GCCGCCCTGG TCCGGTACGC GCTGGGGGAG AGGCCGCCGC CGCAGACCGA CAACGGACTG
GACGCCGAGC TGCGCCGGTT CGGGCTGGCC GCCACCGGCG TCTCCCGCGC GGACGACGAC
GAGGAGGGCA ACCCCCGCCA CCTGGCCGAA CTCGACGACG GCCGCCGGGT GGAACTGGTC
GTGCTCAGCT CCGAGAACAC CGCCGGGTTC TGGCGGCGCC TGCGCGACCT GCTGTTCCTG
CGCGGTCCCG TGGCGCCCCG GATGCTCTAC GGCGTGCGCC GCCGCGCCGA GCACGCCGCT
CTGATGAGCT TCTCCGCCCG GCAGGCGGGG GCCGCCGTCC CCCGGGTCCT GGCCGTCGGC
GAACTCGGGC CCGGCACCGT CCTGCTGGTC CGCGAGCTGC CCGCCTTCCG CGCGCTGGAC
GCGCTCGACG ACGAGGAGCT CACCGACGAG CTGATCGACC TGTGCTGGCG CGAACTCGGA
CTGCTGCACC GCCACCGGCT CGTCCACGGC AACGTCAACG GCGCCACCGT CGGTGTCCTG
GACCAGCCCT GCGACCCTGC CAGCGCCTCC GTCCCCGAGG GCGCATCAGA ACCGGCAGAC
GCCGCCACCT CGGCAGGCAC CTCCGAAACC GCGGTCCCGC CGGTCCCGGC GGCCTCTCGT
GAAGCGGCGG TCCTGCTCAC CGGCCTGGAC CGCGGCGGCG TGGCCGCCCC CCAGCTCCAG
GTCTGGCTGG ACCAGGCCGC CATGCTCACC CTGCTGGCCA TGCGGGTGGG GTCCGGGCGC
GCCGTGGACT CGGCGGTGCG CGCGCTGGGC GTGACCGCCA CGGCCGCGGT CCTGCCCTTC
CTGCAACCCG CAGGCCTGCC CTACGCGCTG CGCAGGGGGC TGCGCGGGGA CCGCGGGCTC
CTGGCCAGGC TGCGCGAGCG CGTGGTGCGC ATCGCCCCGG AGGCGCCCTC CGAACCCGCC
CGCCTGGAGC GCATGCGTCC GCGCACCGTG GTCAGCGTCA TCGTCGCCAC CGTCGTCGGC
CTGGTGCTGC TGTACCAGCT CACCGGCGTG GACTTCACCG CCATCGGCCG GGCCGACCCG
GTGTGGACGC TGGCCGCGCT CGCCGCGTCG GTGGTGTGCA CGCTCTCCGC CGCGATGATC
CTCATCGGCT TCGTGCCCGT GCCGCTGCCG TGGTGGCGCA CCGTCATGGT CCAGTACGCG
GGGTCGTTCG TGCGCATCGC CGCCCCCGCC GGGCTGGGGT CGCTCGCGAT CAACACCCGG
TTCGTCACCA GGGAGGGGGT CTCGACCTCC CTGGCCCTGT CCGCGGTGGG CCTCACCCAG
CTGGTCGGGT TCCTGGTGCA CGTGCCGCTG CTGCTGGTGT GCGCCTACCT CACCGGCACC
TCGTACTGGA CCGGGTTCAC GCCCTCCCCG ACCGTCGTCG TGATCAGTGT CGCCGGAACG
GCCGTGGTGG GGGTGGTCCT GCTGCTGCCC CGGCTGCGGC ACGCCCTCGG CGCCCGGATC
CGGCCCTACC TGCGCGGGGT GCTGCCGCGG CTGCTGGACA TGCTCCAGAG CCCGTCCAGC
CTGCTGCTCG GCTTCGGCGG AACGCTGCTG ATCACCGCGG CGTTCGTGCT GTGCCTGCAG
TTCTCGGTCC TGGCCTTCGC CGACCCGGGC GCCCAGGTGA GCCTGGTGGC GGTCGCGGTG
GTGTTCCTGG CGGGCAACGC CATCGGCTCG GCCGCGCCCA CGCCCGGCGG CCTGGGTGCG
GTGGAGGCCG CCCTGATCGG CGGCCTGACC ACCGTGGCGG GCGTCCCCGC CGCCGTCGCG
CTGCCCGCGG TGCTGCTGTT CCGGCTGCTG ACCTTCTGGC TGCCGGTCCT GCCGGGCTGG
GGGGCCTTCT CCTACCTCCA GCGCCGCGAG GCCATCTGA
 
Protein sequence
MIAVRVVTDG VEGTDPDRLR ALLPSGLLLL VAAGANLLLI VLVSYVVLRT LFTGRLRSLV 
RPVAAGIAAY TLASLINATL FALIGPERFP DALAPDDVFT SATLGYVAAV LAFIRTMPTG
LPRVRSILWA GNTTVAVCAL LAGVTSLLAL VLTVLVGLTC AALVRYALGE RPPPQTDNGL
DAELRRFGLA ATGVSRADDD EEGNPRHLAE LDDGRRVELV VLSSENTAGF WRRLRDLLFL
RGPVAPRMLY GVRRRAEHAA LMSFSARQAG AAVPRVLAVG ELGPGTVLLV RELPAFRALD
ALDDEELTDE LIDLCWRELG LLHRHRLVHG NVNGATVGVL DQPCDPASAS VPEGASEPAD
AATSAGTSET AVPPVPAASR EAAVLLTGLD RGGVAAPQLQ VWLDQAAMLT LLAMRVGSGR
AVDSAVRALG VTATAAVLPF LQPAGLPYAL RRGLRGDRGL LARLRERVVR IAPEAPSEPA
RLERMRPRTV VSVIVATVVG LVLLYQLTGV DFTAIGRADP VWTLAALAAS VVCTLSAAMI
LIGFVPVPLP WWRTVMVQYA GSFVRIAAPA GLGSLAINTR FVTREGVSTS LALSAVGLTQ
LVGFLVHVPL LLVCAYLTGT SYWTGFTPSP TVVVISVAGT AVVGVVLLLP RLRHALGARI
RPYLRGVLPR LLDMLQSPSS LLLGFGGTLL ITAAFVLCLQ FSVLAFADPG AQVSLVAVAV
VFLAGNAIGS AAPTPGGLGA VEAALIGGLT TVAGVPAAVA LPAVLLFRLL TFWLPVLPGW
GAFSYLQRRE AI