Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1532 |
Symbol | |
ID | 9245382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 1877778 |
End bp | 1878992 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003679467 |
Protein GI | 297560493 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.427318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGAGA TCGTCCTCGA TGGCGTTGAC AAGATCTACG GCGGCGACGT CAAGGCCGTC GACAACCTGA ACCTGAAGAT CGAGGACGGC GAGTTCATGG TGCTCGTCGG CCCCTCCGGC TGCGGCAAGT CCACCGCGCT GCGCATGATC GCGGGCCTGG AGGAGATCAC GGGCGGCACG CTGGTCATCG GCGACGAGAT CGTCAACGAC CGCCCGCCCA AGGACCGCGA CATCGCGATG GTCTTCCAGA ACTACGCGCT CTACCCCCAC ATGACCGTCG AGCAGAACCT GGCCTTCGGC CTCAAGCTGC GCAAGGTGGC CAAGCCCGAG ATCGCGCGCC GTGTCAAGGA GGCGGCCGAG ATGCTGGGCC TGGAGACCTA CCTCAAGCGC AAGCCGGGCG CCCTCTCCGG CGGTCAGCGC CAGCGTGTGG CCATGGGCCG CGCGATCGTG CGCGAGCCGC GCGCGTTCCT CATGGACGAG CCGCTGTCCA ACCTGGACGC CAAGCTGCGC GTGCAGATGC GCGCCTCCCT CAACCAGCTC CACGAGCGCC TGGGCGTCAC CACCATCTAC GTCACCCACG ACCAGATCGA GGCCATGACC CTGGGCGACC GGGTCGCGGT GATGCGCGAC GGGCGCCTCC AGCAGGTGGA CACCCCCAAG CGCCTGTTCG ACGCCCCCGT CAACCTGTTC GTGGCCGGGT TCATCGGCTC CCCGGCGATG AACTTCGTCG ACGCCGAGCT GGTCGCCGAG GGCGACGGCG CGGTGCTCAC CTTCGCCGAG CACAAGCTGC CGGTCCCGGC GAGCGTCCTG GAGGCGCGCC AGGGCCTGCG CGACTACCTG GGCCGCAGCC TCATCCTGGG CATCCGCCCC TCGGACTTCA ACGACGCCGA CCTGGACGGC AACGGCGACC CGCAGATCCA GGTCAAGGCG AGCGTGACCG AGGAGCTGGG CACGGAGATC AACGTGATCT TCACCGTGGA CGCCCCGCCG GTGCGCCACG AGGACGCCGC CGCCCTGGCC AAGGACGCCG CGGGTGAGGA GGGTGAGGGC GACGGCCTGC CGCTGGGCGG CAACACCTCG CTGTTCACCG CCCGGGTCAG CCCCCGCAGC AGCGTGCGCC CGGGTCAGCC GGTCAGCCTG TCGGTGGACG TGAGCCAGCT GCACTTCTTC GACCCACAGA GCGGCCTGGC CATCGGCCAC CCCGACAACG TCTGA
|
Protein sequence | MAEIVLDGVD KIYGGDVKAV DNLNLKIEDG EFMVLVGPSG CGKSTALRMI AGLEEITGGT LVIGDEIVND RPPKDRDIAM VFQNYALYPH MTVEQNLAFG LKLRKVAKPE IARRVKEAAE MLGLETYLKR KPGALSGGQR QRVAMGRAIV REPRAFLMDE PLSNLDAKLR VQMRASLNQL HERLGVTTIY VTHDQIEAMT LGDRVAVMRD GRLQQVDTPK RLFDAPVNLF VAGFIGSPAM NFVDAELVAE GDGAVLTFAE HKLPVPASVL EARQGLRDYL GRSLILGIRP SDFNDADLDG NGDPQIQVKA SVTEELGTEI NVIFTVDAPP VRHEDAAALA KDAAGEEGEG DGLPLGGNTS LFTARVSPRS SVRPGQPVSL SVDVSQLHFF DPQSGLAIGH PDNV
|
| |