Gene Ndas_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1163 
Symbol 
ID9245013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp1419008 
End bp1420210 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003679110 
Protein GI297560136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.340868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.375797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACCC CGACGAACAA CGCGACGACG CGGTTCCCGG CACGGGCGGC GCTGCCCGTG 
CTGCTGTCCG CAGGACTGCT GCTGACCGCC TGCGGAACCG GCGAGGAGGC CCCGCAGGAG 
CAGGGCGGCG AGGAGCGGGC CGCCGCGCAG GCCGTGGTGG ACAACCCGGT CGTCACCACC 
TACGACGGCG GCCTGTACGT CCTGGACGGC CAGACCCTGG AGGTCGTCCA GGACATCGCC 
CTGGAGGGGT TCAACCGGAT CAACCCGGCG GGCGACGACC GGCACGTGCT GGTCTCCACC 
TCGGAGGGCT TCCAGGTCCT GGACGCGGCC GGCGCGGAGC TGACCGACAC CCTCTTCCCC 
GCCGACACCC CCGGGCACGT CGTCCGGCAC GCGGGCCGGA CCGTGCTGTT CGCCGACGGC 
AGCGGCGAGA TCACCGCCTT CGACACCGAC TCCCTCGGCG ACGGCCTGCC CGAGACCGAC 
GTGACCAACG CGGAGGAGGC CCACCACGGC GTGGCCGTGG AGCTGGCCGA CGGCGAGATG 
CTGCTGACCC TGGGCGACGA GGAGGAGCGC GTCGGCGCCG TCGTCCTGGA CGCCTCCGGC 
GAGGAGGTCG CCCGCAGCGA GGAGTGCCCG GGCGTGCACG GCGAGACCAC CGCCGAGGGC 
GAGGCGGTCG TCATCGGCTG CGAGGACGGC GTCCTGGTCT ACCAGGACGG CGGGTTCACC 
AAGGTGGACA GCCCCGACGA GTACGGGCGC ATCGGCAACC AGGCCGGGAG CGAGGAGTCG 
CCGATCGTGC TGGGCGACTA CAAGACCGAC CCCGACGCCG AGCTGGAGCG TCCCGAGCGG 
GTCGCGCTCG TGGACACCGC CGCGGGCGAC CTGACCCTGG TGGACCTGCC CGCCAGCTAC 
ACCTTCCGCT CCCTGGGCCG CGGCCCCGAG GGGGAGGCCC TGGTCCTGGG CACCGACGGC 
AGCCTGCACG TGATCGACCC CGAGGCGGGC GAGGTCGTGG ACAGCATCGA GGTCATGGAC 
GAGTGGCAGG AGCCGCTGGA GTGGCAGCAG CCCCGCCCGG CGCTGTTCGT GCGCGGCGCG 
ACCGCCTACG TGAGCGACCC CGCCACGAAG CAGGTCCACG CCCTGGACCT GGAGTCCGGT 
GAGGTCACGG CCTCGGTGAC CCTGGACGCC GAGCCCAACG AGCTCAGCGG CGTCGCGTCC 
TAG
 
Protein sequence
MNTPTNNATT RFPARAALPV LLSAGLLLTA CGTGEEAPQE QGGEERAAAQ AVVDNPVVTT 
YDGGLYVLDG QTLEVVQDIA LEGFNRINPA GDDRHVLVST SEGFQVLDAA GAELTDTLFP 
ADTPGHVVRH AGRTVLFADG SGEITAFDTD SLGDGLPETD VTNAEEAHHG VAVELADGEM 
LLTLGDEEER VGAVVLDASG EEVARSEECP GVHGETTAEG EAVVIGCEDG VLVYQDGGFT 
KVDSPDEYGR IGNQAGSEES PIVLGDYKTD PDAELERPER VALVDTAAGD LTLVDLPASY 
TFRSLGRGPE GEALVLGTDG SLHVIDPEAG EVVDSIEVMD EWQEPLEWQQ PRPALFVRGA 
TAYVSDPATK QVHALDLESG EVTASVTLDA EPNELSGVAS