Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1108 |
Symbol | |
ID | 9244955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1358310 |
End bp | 1358975 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | CBS domain containing membrane protein |
Protein accession | YP_003679055 |
Protein GI | 297560081 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.512511 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA CCGTCGGCGA CCTGATGACC ACGAGTGTCC TGGCCGCCCG GGACGACGCC GGGTACAAGG AACTGGCCGC CTTCATGCGG GACCACCATG TCAGCGCGGT GCCCGTGGTG GACGGCGGGC ACCGCGTCCT GGGCGTCGTG TCGACCGCCG ATCTGCTGCT CAAGCTCGCC GACCCCGATC CGGAGGAGGG GTACACCGGC GAGCCCTTCC GTGAGCGGCT CGCCCGGATC AAGAGCACGG GCACGACGGC TCGCGAGCTG ATGACCTCTC CGGCGGTCAC CGTCACCGCC GCCACCGCGC CCCGTGAGGC GGCGGGGCTG ATGAGACGGC ACGGGTTCAG GCGGCTGCCC GTGGTGGACG GGGACGGGCG CCTCGTGGGC CTGGTCGGCC GGTCGGACCT GCTGCACGTG TACGCGGTGG ACGACGCGGA CCTCGAACGG CGGGTGCGGG AGGACGTCGT CCGCGGCCGG TTCGGGCTGA CCGACGTGGA GACCGGCGTC AGCCACGGCG TGGTCACCCT GAGCGGCGAG GTCGCGCGCC GGTCCGACAT CCCCCGTCTG GCGCACGCGG TGCGCGACGC CGAGGGCGTG GTCCACGTCC GCTGCCACCT GACCCACCGC CTCGACGACC TCACCCTCGG AGGAACGTCC CGATGA
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Protein sequence | MTKTVGDLMT TSVLAARDDA GYKELAAFMR DHHVSAVPVV DGGHRVLGVV STADLLLKLA DPDPEEGYTG EPFRERLARI KSTGTTAREL MTSPAVTVTA ATAPREAAGL MRRHGFRRLP VVDGDGRLVG LVGRSDLLHV YAVDDADLER RVREDVVRGR FGLTDVETGV SHGVVTLSGE VARRSDIPRL AHAVRDAEGV VHVRCHLTHR LDDLTLGGTS R
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