Gene Ndas_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1023 
Symbol 
ID9244869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1250996 
End bp1251805 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003678972 
Protein GI297559998 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.048156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0140553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAAAAC AGTACGTCAT GCGGTTTTCG CGCGGCAAGT GCTACAGTCG CGCCATGGCA 
CGACGAGGCT CCTACGCGAA GGGCGTGGCC AAGCGCGGGG AGATCCTCGA CGCGGCGCTC
ACCGTCATCG GACGCGACGG GTACAGCCGC GCGACGGTGC GCGAGATCGC CGACGCGGTC
GGACTCAGCC AGAACGGCCT GCTGCACCAC TTCGGGAGCA AGGAACGGCT CTTCGTCGAG
GTGCTGCGCC ACCGCGACGA ACTCGACCGG CTGGCCTACG GGGAGGGCGC CGACCGGGGT
TCCGAGGCCG GTGCTCGGCG TCCCGGCGGT GCCGGAGAAA GCCCCGACGG CGCCGAACGC
GGTCCTGACG CCGCCGGACG CCCCGGCATC GCCGATTCGC TGGTGCGGCT GGTCCGGCAC
AACGCCGGGG TGCCGGGCCT CGTGCAGTTG TACTCGCGCC TGTCCGCGGA GGCCGCCGAG
GAGGGGCATC CCGCCCACGG CTTCTTCCGG GAGCGCTACG CCACGGCCCG CGGGATCATC
GCGGAGGAGA TCCGGCGCCT CCAGGCGCAG GGGCGGTTCT CCGCAGAGCA GGACGCCGAC
CGCCTGGCGG TGCTGGCCGT GGCCCTCATG GACGGCCTCC AGGCGCAGTG GTCCTACGAC
TCCGGCGTGG ACATGGCCGA CCACATGGCC CACTTCCTCG GCCTCGTCGG CCTGCGGGCC
GCCGGGCCGG ACCCGGCAGG GGAGGGGCGG GTCCCCGGGG GCGCGGCCCC CGACGGCCCG
GTTCCCGGGG GCTCCACCGC AGAGGGGTGA
 
Protein sequence
MRKQYVMRFS RGKCYSRAMA RRGSYAKGVA KRGEILDAAL TVIGRDGYSR ATVREIADAV 
GLSQNGLLHH FGSKERLFVE VLRHRDELDR LAYGEGADRG SEAGARRPGG AGESPDGAER
GPDAAGRPGI ADSLVRLVRH NAGVPGLVQL YSRLSAEAAE EGHPAHGFFR ERYATARGII
AEEIRRLQAQ GRFSAEQDAD RLAVLAVALM DGLQAQWSYD SGVDMADHMA HFLGLVGLRA
AGPDPAGEGR VPGGAAPDGP VPGGSTAEG