| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1008 |
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| Symbol | |
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| ID | 9244854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 1231574 |
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| End bp | 1233196 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | Pectate disaccharide-lyase |
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| Protein accession | YP_003678957 |
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| Protein GI | 297559983 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACCA GACCCGCCCT CGCGTGCGCC GCCCTACTGG CAGGCACGCT CGTCACGCTT
TCCGGCACCG CGGCGCACGC CGCCACCACC CGCTACGAGG CCGAGGGCAC CTCGGCCTCC
TGCAACGGCA GCATCGAGAC CGAGTGGCCG GGCTACTCCG GCGACGGGTT CTGCGACACC
GAGAACGAGG AGGGCGCCCA CGTGCAGTTC AGCGTGAACG CCCCCGCCTC GGGAACGGCC
ACGCTGACCG TGCGCTTCGC CAACGGCACC TCCTCCGCCC GCCCCGCCGA CGTCCTCGTG
AACGGCTCCC GGACGGCGTC GGTCTCCTTC GAGGGCACCG GCGACTGGGA CGCGTGGACG
ACCAAGACGC TCACCGTCCA GCTGGCCGAG GGCGCCAACA CGATCCGGTT CGACCCGACC
GGTTCCCAGG GCATGCCCAA CGTCGACTAC CTCGACGTGG AGACCAGCGG CGGTGGCGAC
GACGGCGGAG GCGATGACGG CGGCGGTGAC GACGGGGGCG GCGACGACGG CAACCCGCCG
ACCTCGGACG CGTTGTACGT GGCCCCGGGC GGCAGCGCGG GCGCGGACGG CACCGAGTCC
GACCCCACCA CGCTCACCTC GGCCATCGAC CGGATCGAGC CCGGCGGGAC GATCCACATG
CGCGGCGGGA CCTACTCCTT CTCGGACACG GTCACCATCC CGCTGGGCGA GGACGGCACC
TCCGGAAACC GCACGGAGCT GTCCGCCTAC CCGGGTGAGA CCCCGGTGCT GGACTTCTCC
GCCCAGAGCG AGGACTCCGC CAACCGCGGC CTGGCGCTGG AGGCGTCCTA CTGGCACGTC
GAGGGCATCG TCGTCGAGCA CGCCGGGGAC AACGGCATCT TCGTCAGCGG CAGCCACAAC
GTCATCGAGC GCACGGTGAC CCGCTTCAAC CGCGACACCG GCCTCCAGCT CTCGCGCCGC
GTCTCCAGCA CCCCCGAGAG CGACTGGCCC GCCCACAACC TCATCCTGAG CGCGGAGTCG
CACGACAACG CCGACTCCGA CGGCGAGGAC GCCGACGGCT TCGCCGCCAA GCTCACCTCC
GGCCCCGGCA ACGTCTTCCG CTACGCCGTG GCCCACAACA ACATCGACGA CGGCTGGGAC
CTCTACACCA AGGACGACAC CGGCCCCATC GGCACCGTGA CCATCGAGGA CTCCCTGGCC
TACGAGAACG GCATCCTCAG CGACGGCTCC CAGGCCGGCA ACGGCGACCG CAACGGCTTC
AAGCTCGGCG GCGAGGACAT CGGGGTCGAC CACGTCATCA CGGGCAACAT CGCCTACGAC
AACGGCAAGC ACGGGTTCAC CTACAACAGC AACCCGGGCT CGATGACGGT GTCGGACAAC
GTCAGCATCG GCAACGAGGA GCGCAACTTC AACTTCGACG ACGGCTCCTC GGTGTTCCGC
GGCAACACCT CGTGCGACAG CGGTTCCAAC GACCGGATCA TCGGCAACGC CGACAGCTCC
AACCAGTTCT GGTCCGGCTC GAACGGGTCG CGGTGCTCCT CCTACGACGG CGGCCTGGAC
TGGTCCTACG CCGCCGACGG CACCCTGGTC GTGACCTTCG GGGGCCAGCG GGTCACGCCG
TAA
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| Protein sequence | MRTRPALACA ALLAGTLVTL SGTAAHAATT RYEAEGTSAS CNGSIETEWP GYSGDGFCDT
ENEEGAHVQF SVNAPASGTA TLTVRFANGT SSARPADVLV NGSRTASVSF EGTGDWDAWT
TKTLTVQLAE GANTIRFDPT GSQGMPNVDY LDVETSGGGD DGGGDDGGGD DGGGDDGNPP
TSDALYVAPG GSAGADGTES DPTTLTSAID RIEPGGTIHM RGGTYSFSDT VTIPLGEDGT
SGNRTELSAY PGETPVLDFS AQSEDSANRG LALEASYWHV EGIVVEHAGD NGIFVSGSHN
VIERTVTRFN RDTGLQLSRR VSSTPESDWP AHNLILSAES HDNADSDGED ADGFAAKLTS
GPGNVFRYAV AHNNIDDGWD LYTKDDTGPI GTVTIEDSLA YENGILSDGS QAGNGDRNGF
KLGGEDIGVD HVITGNIAYD NGKHGFTYNS NPGSMTVSDN VSIGNEERNF NFDDGSSVFR
GNTSCDSGSN DRIIGNADSS NQFWSGSNGS RCSSYDGGLD WSYAADGTLV VTFGGQRVTP
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