Gene Ndas_0660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0660 
Symbol 
ID9244502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp808797 
End bp810011 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content74% 
IMG OID 
ProductROK family protein 
Protein accessionYP_003678611 
Protein GI297559637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.546685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.645841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAC GTCCGGGGAC TCCCCGGCTG CTACGCCAGC TCAACGACCG CGCGGCACTG 
GAACTGCTCC TGTCCGCGGG GCCCTTGACC AGGACGCAGC TGGGAACGCG TACCGGCCTT 
TCCAAGGTGA CCGCCTCCCA GCTGCTCGCG CGGCTGGAGG AGCGGGACCT GGTGCGCGTC 
GTGGGCAGCC AGGCGGGTGG GCGGGGGCCC AACGCCGCGC TGTACGCGGT GGTGCCCGAG 
AGCGCCTACG TCGCGGCCCT GGACGTCAGC GCGCGCCGGG TGACCGCGAC GATCGCCGAC 
ATCACGGGCC GGATCGTCAG CGACGTCGCG GTCGACCCCA GCGCCTCCGA CGATCCCGTC 
GCGCTCGTCC ACACCGCGGT GATGCGCCTG GCCGAGACCG CGGGGGTCGC GCTGGACAGG 
GTCCGCGCCT GCGTCATCGG CACCCCCGGC GTCGTCGATC CCCGCACCGG CGACATCCGC 
TTCTCCTTCG ACCTGATGTC CTGGCACGAG GGCATCCTGG AGGCCCTGCG CGCCGACCTC 
AAGCGCTCGG TCATGATCGA GAACGACGTG AACCTGGCCG CCCTGGCCGA GCACTCCGAG 
GGCGCCGCCG CGGGGGTGGC CGAGTTCGTC CTCATCTGGC TCAGCGCCAA CGGCGGCGTG 
GGGATGTCCA CCATGATCGA CGGCCGCATC CACCGGGGCC GCTCGGGCGG CGCGGGTGAG 
ATCGGCTACC TGCCCGTGCC CGGGGCGCCC ATGCCCACCG ACGTGGGCCT GTCCGGCGGC 
TACGAGTCCC TGCGCGACGG CGCGAGCCGC GAGCTCCCCC ACGGGTTCCA GGCGCTGGTC 
AAGGCGGGGC AGGTGGTCGA GCTGGCCGCC GGGTACGGCA TCGAGGGCAC CGACGTCACC 
GAGGTGGTCG GGGCGGCCTC CGCAGCGGAG ACCCCGGAGG CGGACGCCTT CCTGAACGAC 
TTCGCCGAGC GCCTGGCCCG CGGGGTGGCC GCCGTCGCGG TGATCCTGGA CCCCGGCCTG 
GTGGTGCTCG GCGGGGACGT GGCCCGGGCG GGCGGTGTGA AGCTGGCCGA GCGGGTCCAG 
GCGGCCACCG CGCGCATCGC CCCGAACGCG ACCGAGGTCG CGCTGGGGAG GGTGGAGGGC 
AGCCCGGTGG TGCGGGGCGC GCTGCTGCAC GCCCTGGAAA GGGCGCGGGA GGACGTTTTC 
TCCTCGACGG TCTGA
 
Protein sequence
MSQRPGTPRL LRQLNDRAAL ELLLSAGPLT RTQLGTRTGL SKVTASQLLA RLEERDLVRV 
VGSQAGGRGP NAALYAVVPE SAYVAALDVS ARRVTATIAD ITGRIVSDVA VDPSASDDPV 
ALVHTAVMRL AETAGVALDR VRACVIGTPG VVDPRTGDIR FSFDLMSWHE GILEALRADL 
KRSVMIENDV NLAALAEHSE GAAAGVAEFV LIWLSANGGV GMSTMIDGRI HRGRSGGAGE 
IGYLPVPGAP MPTDVGLSGG YESLRDGASR ELPHGFQALV KAGQVVELAA GYGIEGTDVT 
EVVGAASAAE TPEADAFLND FAERLARGVA AVAVILDPGL VVLGGDVARA GGVKLAERVQ 
AATARIAPNA TEVALGRVEG SPVVRGALLH ALERAREDVF SSTV