Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0547 |
Symbol | |
ID | 9244388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 677674 |
End bp | 678423 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003678500 |
Protein GI | 297559526 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCTC GCAGCGACAA CCGGCAGAAG GTCATCGAGG CCGCCGCAGA CCTTCTCAGG AACCACGGGC GTACCGCGGT CACCACGCGA GCCGTCAGCA CCGCGGCCGA GGTGCAGCCC CCGACGATCT ACCGCCTGTT CGGGGACATG GACGGCCTGC TCAACGCCGT GGCCGCGGAC GGTTTCACCC GTTACCTGGC GCGCAAGGCG GCCCAGCCCG CCTCGTCCGA CCCGGTGGAG GACCTGCGGG GCGGCTGGGA CCTGCACGTC GGGTTCGGTG TGGAGAACCC GGCCCACTAC CTGCTGATGT ACGGCGACCC CGCGCCGGGC GGGAGCGGTG AGACCGCACG GGAGGCCCGG CGCGTCCTGC TCACGCTGGT GCACCGGGTC GCGGAGGCCG GCCGGCTCGT GGTCGGTGTC GAACAGGCGG CGGACATGGT GCACGCCGCG GGCATGGGCG TCACCCTCAG CCTGATCAGG GCGGGCTCCG ACCGGCCCGA CCTGTCGCTG TCCGTCAGGA CGCGCGAGGC GGTCCTCACG GCGATCACGT CCGCTCCCGG CGCCGACACC GGTGTGGCGG CCGGTACCGG CCCCGGAGCC GACCGGGACC GCGAACCCGC GCGGCGGGCG ATCGCCCTGC GCTCGGTCCT GGACCGGTCG CGGGCGGAGT TCAGCCACGG CGAGCGCATC CTGCTGGGCG AACTCCTCAC CCGCCTGGCC GACGCGGAAC CGGGGTCCCG TGACCTCTGA
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Protein sequence | MASRSDNRQK VIEAAADLLR NHGRTAVTTR AVSTAAEVQP PTIYRLFGDM DGLLNAVAAD GFTRYLARKA AQPASSDPVE DLRGGWDLHV GFGVENPAHY LLMYGDPAPG GSGETAREAR RVLLTLVHRV AEAGRLVVGV EQAADMVHAA GMGVTLSLIR AGSDRPDLSL SVRTREAVLT AITSAPGADT GVAAGTGPGA DRDREPARRA IALRSVLDRS RAEFSHGERI LLGELLTRLA DAEPGSRDL
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