Gene Ndas_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0547 
Symbol 
ID9244388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp677674 
End bp678423 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003678500 
Protein GI297559526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCTC GCAGCGACAA CCGGCAGAAG GTCATCGAGG CCGCCGCAGA CCTTCTCAGG 
AACCACGGGC GTACCGCGGT CACCACGCGA GCCGTCAGCA CCGCGGCCGA GGTGCAGCCC
CCGACGATCT ACCGCCTGTT CGGGGACATG GACGGCCTGC TCAACGCCGT GGCCGCGGAC
GGTTTCACCC GTTACCTGGC GCGCAAGGCG GCCCAGCCCG CCTCGTCCGA CCCGGTGGAG
GACCTGCGGG GCGGCTGGGA CCTGCACGTC GGGTTCGGTG TGGAGAACCC GGCCCACTAC
CTGCTGATGT ACGGCGACCC CGCGCCGGGC GGGAGCGGTG AGACCGCACG GGAGGCCCGG
CGCGTCCTGC TCACGCTGGT GCACCGGGTC GCGGAGGCCG GCCGGCTCGT GGTCGGTGTC
GAACAGGCGG CGGACATGGT GCACGCCGCG GGCATGGGCG TCACCCTCAG CCTGATCAGG
GCGGGCTCCG ACCGGCCCGA CCTGTCGCTG TCCGTCAGGA CGCGCGAGGC GGTCCTCACG
GCGATCACGT CCGCTCCCGG CGCCGACACC GGTGTGGCGG CCGGTACCGG CCCCGGAGCC
GACCGGGACC GCGAACCCGC GCGGCGGGCG ATCGCCCTGC GCTCGGTCCT GGACCGGTCG
CGGGCGGAGT TCAGCCACGG CGAGCGCATC CTGCTGGGCG AACTCCTCAC CCGCCTGGCC
GACGCGGAAC CGGGGTCCCG TGACCTCTGA
 
Protein sequence
MASRSDNRQK VIEAAADLLR NHGRTAVTTR AVSTAAEVQP PTIYRLFGDM DGLLNAVAAD 
GFTRYLARKA AQPASSDPVE DLRGGWDLHV GFGVENPAHY LLMYGDPAPG GSGETAREAR
RVLLTLVHRV AEAGRLVVGV EQAADMVHAA GMGVTLSLIR AGSDRPDLSL SVRTREAVLT
AITSAPGADT GVAAGTGPGA DRDREPARRA IALRSVLDRS RAEFSHGERI LLGELLTRLA
DAEPGSRDL