Gene Namu_5407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5407 
Symbol 
ID8451040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp6052415 
End bp6053548 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content71% 
IMG OID645044437 
ProductparB-like partition protein 
Protein accessionYP_003204659 
Protein GI258655503 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA AGGCCCGAGG CGGTCTGGGA CGCGGCCTGG CCGCACTGAT CCCGACCGGA 
CCCACCACCA CGACGGTGAC CGACGTTCTG ATCAACGGCA CGCCGGCCAA GCGGGAGGCG
CCGCCGCTCG CCCTGGTACC GCCGTCGGCC GAGCCGGCCA CCGAAAAGGC TGACAGTGTC
CTGGCTTCCG GCCCGAGCGA GGCGAGCGAC GGCGAGCACG ACACCACCGC GGCGGCCCGT
CCGGACACTG CGCCGGATGT TGAACGCTCA ACCACGCCGC CGACCGTGCG AGCTACTCCG
GGCGGACCGC GATACGCGGA GATCCGGGTC GAGCGGATCC AGCGCAACGC CCGCAACCCG
CGGACCGTGT TCGACGAGGA CGCGCTGGCC GAGCTCACCC ATTCCATCCG CGAGTTCGGC
CTGCTCCAGC CGATCGTCGT CCGGGAACTG GAACCGGGGA GTTACGAGCT GGTCATGGGC
GAGCGGCGCT GGCAGGCCGC GCAGCGCGCC GGACTGCCCA CCATCCCGGC CATCGTCCGG
CGTACGCAGG ACGCCGAGAT GTTGCGAGAT GCGTTGCTGG AGAACATCCA TCGGGCCAAC
CTGAACCCGT TGGAAGAGGC CGCGGCCTAC CAGCAGCTGC TCCAAGAGTT CGACGTCACC
CAGGAGGAGC TCGCCTCCCG GCTGGGCCGT AGCCGCCCCG TCATCTCCAA CACCATCCGG
TTGCTCAAGC TGCCGATCCC GGTGCAGCGG CGGGTGGCCG CCGGCGTGCT GTCGGCCGGG
CACGCGCGGG CCCTGCTGTC GCTGCCCGAC CCCGACGATC AGGAACAGCT CGCGGCTCGC
ATCGTCGCTG AGGGTCTGTC GGTGCGGGGC ACGGAGGAGG CCGTCACCCT GCTGCTGGGG
CGGACCACCT CCCGTCGCCG GGTCACCGCC CCCAAGCGGG TCATCCCCGG ACTGGAGAAC
CTGGCCGGCG CCCTGTCCGA CGCGTTCGAC ACCCGTGTCC GGCTGGAGAT CGGTCGGACC
AAGGGACGGA TCGTGGTGGA GTTCGCCACC CAGGAGGATC TGCGCCGGTT GATCACGGTG
ATGGCTCCCT CGGCCATCGA CGCGGCCTCG GCCTCCGAAC GCGCCGCCGG ATAG
 
Protein sequence
MTGKARGGLG RGLAALIPTG PTTTTVTDVL INGTPAKREA PPLALVPPSA EPATEKADSV 
LASGPSEASD GEHDTTAAAR PDTAPDVERS TTPPTVRATP GGPRYAEIRV ERIQRNARNP
RTVFDEDALA ELTHSIREFG LLQPIVVREL EPGSYELVMG ERRWQAAQRA GLPTIPAIVR
RTQDAEMLRD ALLENIHRAN LNPLEEAAAY QQLLQEFDVT QEELASRLGR SRPVISNTIR
LLKLPIPVQR RVAAGVLSAG HARALLSLPD PDDQEQLAAR IVAEGLSVRG TEEAVTLLLG
RTTSRRRVTA PKRVIPGLEN LAGALSDAFD TRVRLEIGRT KGRIVVEFAT QEDLRRLITV
MAPSAIDAAS ASERAAG