Gene Namu_5317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5317 
Symbol 
ID8450950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5946562 
End bp5947977 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content73% 
IMG OID645044350 
Productpeptidase U62 modulator of DNA gyrase 
Protein accessionYP_003204572 
Protein GI258655416 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGGG GAGCGGGCGG CCTGCTGACG CCGCCGCAGA TCATCGAGGT GGCCCTGGCG 
GCCAGCCGGG CCGACGGCTG CATCGTGGTG GTGAACGGAT CCACTTCGGC CAACATCCGG
TGGGCCAACA ACACCGTCAC CACCAACGGG GTGGCCCAGG ACCTGTCCTG GTTCGTGGTG
TCCGTCGTCG GCGGGGCGGC GGCCACCGTC GCCGGGTCGG CCTCGGACGC CGCCTCGGCC
GAGGCGGTGC GGGCCGTGGT GGCCGCCGCC CACGAGGCCG CCGTGGCCGC CTCCCGGCTG
GGTCCGGCCC GGGATGCCCA ACCCCTGATC GAACCGACCG GCGGTGCCCC GGCCGACTTC
GACGACGAAC CCGTGGACAC CTCGTTCGCG GTCTTCGACA CCTTGCTCAC CGGCCTGGTC
GACGCGTTCG CGGCCGCCCG GTCGGACGGC CGGGTGCTCT ACGGGTTCGT CGACCACACC
GTCACCACCA CCTATCTGGG GTCCTCGACC GGACTGCGCC GGCGCTGGGT GCAGCCCACC
GGGACCCTGG AGGTCAACGC CAAATCGGCC GACCTGCGCC GCTCGGCGTG GGCGGGGGTC
TCCACCCCGG ACTTCCGTGA CGTCGAGCTG GATCGGGTGC TCGCCCCGTT GGTGGCCCGG
CTGGACTGGG CCAAGCGGTC GATCGACCTG CCGCCGGGCC GGTACCGGAC GGTGCTGCCG
CCGACCGCCG TCGCCGACCT GATGATCTAC CTGGCCTGGA GTTCCGGAGC CCGGGAAGCG
CACGAGGGCC GATCGGCGTT CGCCGCGCCG GGCGGCGGCA CCCGGTCCGG GGAGCGGCTG
ACCGACCTGG GGCTGACCAT GTTCAGCGAC CCCGACCAAC CTGGGCTGGC CGCGGCGCCG
TTCGTGGTGG CCGGGCACTC CAGCGACGAC GTCTCGGTCT TCGACAACGG GGCCCCGATC
GGGCGGCACG AGTTCGTCCG CGACGGGGTG ATCGGTTCCC TGCTGCACAC CCGGGGATCG
GCCGCCGAGT TCGGCGAGCC GTTCACCCCG TCCTCCGACA ACCTGGTGCT CACCGGCGGT
CAGGCCGACC GGGACATCGA CGCGCTGGTC GCCGACGTCG ACCGCGGGCT CCTGCTGACC
TCGCAGTGGT ACATCCGCGA GGTCGATCCG GCCACGCTGC TGCTGACCGG GCTGACCCGG
GACGGGGTGT TCCTGGTCGA GCAGGGCGAG GTGGTCGGGG CGGTAAACAA CTTCCGGTTC
AACATGTCGC CGCTGGACAT CCTGCGGCAG GCGGCCGACG TGGGGGCGAG CGTGCCGACC
CTGTCCCGGG AGTGGGCCGA CTGGTTCACC CGCACCGCGA TGCCCCCGAT CACCGTGGAC
GGCTTCAACA TGTCGTCGGT GTCGCCCGCT ACCTGA
 
Protein sequence
MSGGAGGLLT PPQIIEVALA ASRADGCIVV VNGSTSANIR WANNTVTTNG VAQDLSWFVV 
SVVGGAAATV AGSASDAASA EAVRAVVAAA HEAAVAASRL GPARDAQPLI EPTGGAPADF
DDEPVDTSFA VFDTLLTGLV DAFAAARSDG RVLYGFVDHT VTTTYLGSST GLRRRWVQPT
GTLEVNAKSA DLRRSAWAGV STPDFRDVEL DRVLAPLVAR LDWAKRSIDL PPGRYRTVLP
PTAVADLMIY LAWSSGAREA HEGRSAFAAP GGGTRSGERL TDLGLTMFSD PDQPGLAAAP
FVVAGHSSDD VSVFDNGAPI GRHEFVRDGV IGSLLHTRGS AAEFGEPFTP SSDNLVLTGG
QADRDIDALV ADVDRGLLLT SQWYIREVDP ATLLLTGLTR DGVFLVEQGE VVGAVNNFRF
NMSPLDILRQ AADVGASVPT LSREWADWFT RTAMPPITVD GFNMSSVSPA T