Gene Namu_5288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5288 
Symbol 
ID8450921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5907246 
End bp5908364 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content74% 
IMG OID645044321 
Productprotein of unknown function DUF182 
Protein accessionYP_003204543 
Protein GI258655387 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCGCC AAGACCTGGA CGAGCGGGCC GCGCAGCTGC GCACGGCCGG GGTGCCGTTC 
GTCCGCGCGC GGGTCGTGCT GGCCCGCCGG CCGACGTCGG CCCGGGCCGG CGACGAGGCG
ATCGTGCACG CCGACGGGTC GATCGAGGGA TTCGTCGGCG GTACGTGCGC CGAGTCGACC
GTCCGGGTGC AGAGCCTGCG CCTGCTGGGA CGCCCGGAGC CGCTGCTGTT GCGCATCGTC
CCCGACGACG GCGTCGGGCG CGGCGACGGT GACGGTCACG AAGACGGTGC GGCCGAACCG
GCGGGCACCC TGACCGTGCA CAACCCGTGC CTGTCCGGCG GTGCCCTGGA GATCTTCCTC
GACCCCGTCG TGCCGGCGCC GCTGGTGCTG GTGCACGGCG ACGGCCCGGT CGCCCAGGCC
CTGCGGCAGG TGACCGAGGC GGCCGGCTAC CGCTGCGCCG AGGCCGCGGC GCAGACCGTC
CCGGGCGCGG ACGCCGTCGT CGTCGCCTCG CACGGCCGCG ACGAGACGGC CGTGCTGGCC
GCGGCGATCG AGGCCGGCGT CGGCTACATC GGGCTGATCG CCAGCCGCCG TCGCGGCGCC
GCCGTGCTGG CCGAGATCGC CGCCGCCCGG CCCGATCTCG CGGAACAGCT GCGCCAGCGG
GTGGACACCC CGGCCGGCCT GGACCTCGGT GCCCGCACCG CCGGCGAGAT CGCGGTCTCC
GTCCTAGCCG CCATCGTGCA CTCCCGGGCC CACCCTCCCG CGCGGATCAA CTTCGCCGGC
GCGGATGAAA CTGCACCGAA TGTGAATGGT GGGACAGAAG TCAACGACTT GAGCCGCGCA
GGTATCCACA GCGGAGGTGG GGACACCCGC GCGGATGAAA CGGCACCGAA TGTGAATGGT
GGGACAGAAG TTGCCGACTT CGCCCGCGCC GGGGAAGTTG ATCCGCGCGA GGATCAGGGG
CGAGGGCGGG GGGAGGCGGT CGACCCGGTG TGCGGGATGA CGGTGGCCAC GGTGCCGGCG
AGCGAGCGGG CGGAGTACGA CGGGCGGACC GTGTGGTTCT GCGGACCGGG ATGCCGGAAC
GCGTTCCTGG CGGACCCCAC TCGGTACCCT GAGTCGTGA
 
Protein sequence
MGRQDLDERA AQLRTAGVPF VRARVVLARR PTSARAGDEA IVHADGSIEG FVGGTCAEST 
VRVQSLRLLG RPEPLLLRIV PDDGVGRGDG DGHEDGAAEP AGTLTVHNPC LSGGALEIFL
DPVVPAPLVL VHGDGPVAQA LRQVTEAAGY RCAEAAAQTV PGADAVVVAS HGRDETAVLA
AAIEAGVGYI GLIASRRRGA AVLAEIAAAR PDLAEQLRQR VDTPAGLDLG ARTAGEIAVS
VLAAIVHSRA HPPARINFAG ADETAPNVNG GTEVNDLSRA GIHSGGGDTR ADETAPNVNG
GTEVADFARA GEVDPREDQG RGRGEAVDPV CGMTVATVPA SERAEYDGRT VWFCGPGCRN
AFLADPTRYP ES