Gene Namu_5271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5271 
Symbol 
ID8450903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5886822 
End bp5887493 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content74% 
IMG OID645044303 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003204526 
Protein GI258655370 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAGCC CCGCGATCGG TCGCGTCGAC CGGCGAAAGG CCCGTACCCG GGCCGCGCTG 
ATCGCCGCCG GGCAACGGAT CCTGGCCGAC CGCGGGACCA CCGAGGTGGC CGTGCAGGAC
ATCACCGACG AGGCCGGCGT CGGCCTCGGA TCGTTCTACA ACCACTTCAC GACCAAGTCC
GAGCTGTTCG AGGCGGCCGT GTTCGACCTG CTCGACGCGT TCGCCGCCGG TATCGACGCG
GCCCGGGCTG ACGTGCAGGA TCCGGCCGAA CTGGTCGCGA TCGGCATTCG CTCGACCTGC
CGGCTGGCCG CCACCCGGCC GGCCGTGGCC CGGGTGCTGG TGTTGACCGG TCCCGAGTTC
CTGGTGGCCG ACCGGGGTCT GGCCCCGCTG GCCAGCCGGG ACCTGCGGCA GGGGCTGGCG
TCGGGCCGGT TCACCCTGGC CCGTCCGGCC CTGGCCCTGG CCGTCGTCGG TGGCAGCGTG
CTGGCCTTCC TGCAGATGCG GCTGACCGCG GACGGGAGCG GCTCGGTCAC CGACGCCGAC
GCCGACCTGC TGGCCGCGAC CCTGCTCACC ACCCTGGGCC TGCCGGCCGC CGAGGCGGCC
GAGATCGCCC ACCGACCCCT GCCCGTCCTC GATCCGCCGC CCGGACCCAC ACCCCAAGGA
GAACCTTCAT GA
 
Protein sequence
MSSPAIGRVD RRKARTRAAL IAAGQRILAD RGTTEVAVQD ITDEAGVGLG SFYNHFTTKS 
ELFEAAVFDL LDAFAAGIDA ARADVQDPAE LVAIGIRSTC RLAATRPAVA RVLVLTGPEF
LVADRGLAPL ASRDLRQGLA SGRFTLARPA LALAVVGGSV LAFLQMRLTA DGSGSVTDAD
ADLLAATLLT TLGLPAAEAA EIAHRPLPVL DPPPGPTPQG EPS