Gene Namu_4796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4796 
Symbol 
ID8450426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5335709 
End bp5336797 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content75% 
IMG OID645043836 
Productaminotransferase class V 
Protein accessionYP_003204061 
Protein GI258654905 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.688685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGAC CGGTCACCCG GCCCGCGGCT CGGCCGACCG TCGCGCAGGC CGCCACCCTG 
TGGGACGCCG CGCCCGGCTA CCTCAACACT TCCTCCTACG GGCTGCCACC CCGGCCGGCC
TGGGACGCCC TGCAGGCCGC CCTGGGCGAC TGGCGCACCG GCCGGACCAG CTGGGAGGGC
TGGGCGCGCA GCGTCGAGCA GTCGCGGTCG CGATTCGCCG ACCTGCTCGG CGTGCCGGCC
GCCACGGTGG CCACCGGGGC GTCGACCTCG CAGCTGCTGG CCCCGGTCGC CGCGGGCATT
CCCGACGGCA GCGTCGTGCT CGTCCCGGAC ATCGAGTTCA CCTCCAACGT CTTCCCGTGG
GCGGTGCACG CCGACCGCGG GGTGCGGGTG ATCACCGCCC CGACCGACCG CTTCCTGGAC
GCCATCACCG GGGACGTCGA CGTGGTCGCC TACTCGGCCG TGCAGTCGGC GACCGGCGAG
GTGGCCGACG TGACGGCGAT CGGCCGGGCC GCGCGAGCGG TGGGGGCGCT CACCGTCGTG
GACGCCACCC AGGCGGTCGG CTGGTTGCCC GTGGACGTCG ACGCGGCCGA CCTGCTGGTG
AGCCACGCCT ACAAATGGCT GTGCAGCCCG CGCGGCACCG CGTTCGCGGT CCACCACCCC
ACGCTGGCCG AACGGCACCC CGAGCTGACG TTGAAACCGT TGGCCGCCAA CTGGTTCGCC
GCACAGGACA TCCACGGCTC GTACTACGGC CGGCCGATGA AGCTGGCCGC CGACGCCCGC
CGGTTCGACA TCTCCCCGGC CTGGCACTGC TGGGTCGGCA CCGACCCGGC GCTGCGGGTC
CTGGCCGAGG TCGGGGTACC GGCCATCCAC GCGCACAATC TGGGCCTGGC CACCACCTTC
CTCGCCGCCC TGGACCAGCC GCCGTCGGAC TCGGCCATCG TCAGCGTGGC CGCGGGGGAC
GCCGCGGTCG ACCGGTTGCA CGCCGCCGGC GTGCGGTTCG GCCTGCGGGC CGGCCGGGTA
CGGGTGGCGT TCCACCTCTA TTCGACGGAG GACGACGTCG AGCTCGCCGT GCGGGCGCTG
CGCGGCTGA
 
Protein sequence
MTGPVTRPAA RPTVAQAATL WDAAPGYLNT SSYGLPPRPA WDALQAALGD WRTGRTSWEG 
WARSVEQSRS RFADLLGVPA ATVATGASTS QLLAPVAAGI PDGSVVLVPD IEFTSNVFPW
AVHADRGVRV ITAPTDRFLD AITGDVDVVA YSAVQSATGE VADVTAIGRA ARAVGALTVV
DATQAVGWLP VDVDAADLLV SHAYKWLCSP RGTAFAVHHP TLAERHPELT LKPLAANWFA
AQDIHGSYYG RPMKLAADAR RFDISPAWHC WVGTDPALRV LAEVGVPAIH AHNLGLATTF
LAALDQPPSD SAIVSVAAGD AAVDRLHAAG VRFGLRAGRV RVAFHLYSTE DDVELAVRAL
RG