Gene Namu_4683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4683 
Symbol 
ID8450313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5205418 
End bp5206614 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content67% 
IMG OID645043724 
ProductABC transporter related 
Protein accessionYP_003203949 
Protein GI258654793 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCCG TGGTACTGGA CAAGATCAAC AAGGTTTACG AGAACGGCTT CCACGCCGTT 
CACGACCTGA GCATCGACGT GGCTGACGGC GAGTTCCTGG TCCTGGTGGG CCCGTCCGGC
TGCGGCAAGT CCACCGCGCT GCGGATGGTC GCCGGTCTGG AGGACATCTC CACCGGCAAC
CTGCTCATCG GTGGGCGGCG GGTGAACGAC GTCGACCCGC AGGGCCGGGA CATCGCGATG
GTGTTCCAGT CCTACGCCTT GTACCCGCAT ATGAGCGTGC GGGACAACAT CGCCTACGGC
CTCAAGCTGC GCAGGATGCC CAAGGACGAG ATCGAGCGGC GGATCGCCAA GGCGGCCGAC
ATGCTCGAGC TCACCCCGCT GTTGGACCGC AAGCCCAAGC AGCTTTCCGG CGGCCAGCGT
CAGCGCGTGG CGATGGGGCG CTCGATCGTG CGTGAACCCC AGGTCTTCCT CATGGACGAG
CCGCTGTCGA ACCTGGACGC CAAGTTGCGG GTGCAGATGC GGGCCGAGAT CTCCGCCGTG
GTGCGCTCGC TGAACACCAC CACGCTCTAC GTCACGCACG ACCAGACCGA GGCCATGACG
ATGGGCGACC GGATGGCGGT GATGAAGGCC GGAATCCTGC AGCAGCTCGG CTCGCCGAGC
GACTGCTACG ACACCCCGGT CAACATCTTC GTCGCGCAGT TCGTCGGTTC GCCGCCGATG
AACCTGGTCA CCGGGCACAT CACCCAGGGT GCCAACGGTC TGGAGGTGAA GATCGGCGAC
ACCGGCCTGC AGATCCCCGA GTCCGTGGTC TCCGCACGGC CCGCCCTCAA GTCGTTCGTC
GGCAAGCCGG TGGTCGTCGG CGTCCGCAGT GAGGACATGG AGGACGCCAA CCTGGCCCGC
GACGCCGATG AGACCCGGCG GATCAAGGGC AAGGTGACGT TGACCGAGGC CCTGGGGTCG
GAGCTGGTCG TGCACTTCAC CTTCCCCGGT GAACGGGTGG AGACCGCGGA CACCAAGCTC
ATCGAGAAGG AGGCCGGGGC CGAAGGACTC CGCGTCGGGC CGGAGCTCGG GGTGACGTGG
GTGGCCTCGT TCGCACCGCG GTCCCGGGTG CGGATGGGCG ATGACATCGA GGTGGCCGTC
GACGTCGAGC GCGTCCACTA TTTCGATCCC GAGACATCGC TGGCCATCTG GACCTGA
 
Protein sequence
MAPVVLDKIN KVYENGFHAV HDLSIDVADG EFLVLVGPSG CGKSTALRMV AGLEDISTGN 
LLIGGRRVND VDPQGRDIAM VFQSYALYPH MSVRDNIAYG LKLRRMPKDE IERRIAKAAD
MLELTPLLDR KPKQLSGGQR QRVAMGRSIV REPQVFLMDE PLSNLDAKLR VQMRAEISAV
VRSLNTTTLY VTHDQTEAMT MGDRMAVMKA GILQQLGSPS DCYDTPVNIF VAQFVGSPPM
NLVTGHITQG ANGLEVKIGD TGLQIPESVV SARPALKSFV GKPVVVGVRS EDMEDANLAR
DADETRRIKG KVTLTEALGS ELVVHFTFPG ERVETADTKL IEKEAGAEGL RVGPELGVTW
VASFAPRSRV RMGDDIEVAV DVERVHYFDP ETSLAIWT