Gene Namu_4533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4533 
Symbol 
ID8450161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5040079 
End bp5040786 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content71% 
IMG OID645043574 
ProductPeptidase M23 
Protein accessionYP_003203801 
Protein GI258654645 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGAG CCGGAGCGCG CTGGCGCCGG TCGGGAGCCG CCCTGGCGGG GGTGCTCCTG 
GCCGGCCTTC TCGTCTCCTG CGGGTCCGAT TCCCGGCCCG ACACCTCTTA CCTGCTGCCG
TGGCCGGGCG GCAGCAGTTT CGCGGTGCTG CAGGGGCCGT TGATCGTGGA CCAGTGGGGT
GCGTGTTCCT CGGGGTGTGG CAGCCACCGG GACGAGGACG GCCAGCACGC CTGGGATTTC
GACCTGCCGG AGGGTACGCC TGTGGTGGCC GCCCGTGGTG GGATCGTCGG GCTGGCGGTC
GGCAGTTGGC CCGCGGACCA CTGTGGCGGG CTGGCGCCGG TCGCTGACCA GCCTCCGGGC
TATCTGGTGA GTGACAGCAT GGGAAACCAG ACCAATCTGG TGCGGATCGA CCACGGCGAC
GGCACCTCGG CGCTGTACCT GCACCTGAGC GAAGTGGACC CGCAGATCCT GACCAAGGCC
AGGACGGGGG AGCCGGTCGT GCGGGGCGAA CAACTGGGGC TCTCCGGGCG GACCGGGCTC
ACCGGCTGTG TGCCACACCT GCACTTCCAG GTCGAGCAGA CCGTCCGGGC CGACTGGTAC
ACCACGTCGC TGCCGATCTC GTTCACCGAC CCGGACGTGC TCGCCCAGGA TCCCAACGGG
GTGCCGGCCG AAGGCGGGAC CTACGTCTCG GGTAACGCGA CCTCGTAG
 
Protein sequence
MIGAGARWRR SGAALAGVLL AGLLVSCGSD SRPDTSYLLP WPGGSSFAVL QGPLIVDQWG 
ACSSGCGSHR DEDGQHAWDF DLPEGTPVVA ARGGIVGLAV GSWPADHCGG LAPVADQPPG
YLVSDSMGNQ TNLVRIDHGD GTSALYLHLS EVDPQILTKA RTGEPVVRGE QLGLSGRTGL
TGCVPHLHFQ VEQTVRADWY TTSLPISFTD PDVLAQDPNG VPAEGGTYVS GNATS