Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4454 |
Symbol | |
ID | 8450081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4942002 |
End bp | 4943162 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645043501 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003203729 |
Protein GI | 258654573 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.455752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCCCG TCGGGTCCGG CAGCGGCCGT CGCGCGCTGG TCGTGCATCC GGGCGCCGAC TTGTACGGAT CCGATCGGGT GTTGCTCGAG ACGGTGGGCG CGCTGGTGGA GGCGGGCTGG GCGGTGACGG TCAGTGTTCC GGCGGCCGGC CCATTGGTTG CCGTCCTGGT CCATCGGGGG GCCAGCGTCC AGGTGTGTCC GACGCCGGTC CTGCGCAAGA GCGTCCTGAG CCCCCGTGGT GCGTTGCGCC TGGTCGGCGA CACGGCCAGA GCAATCCCGT CAGGAGCGGC GTTGATTCGT CGCTGCCAGC CAGACGTGGT GATCGCCAAC ACGATCACCA TCCCGTTGTG GACATTGTTG GGGCGGATGT TGCGCCGGCC GGTCCTGGTC CATGTGCATG AGGCCGAAGG TTCGGTTTCC ATGGTTCGGC AACGGGTGAT GGCCGCGCCC CTGCTGCTGG CCACTGCGCT GGTGGCCAAC AGTCGATGGA CTCGGGACGT GCTGACCAGG TCGTTCGCGC GCCTGGGACC GCGGACCTCG GTCATTTACA ACGGAGTGGC CGGGCCCGCC TCTCCGGTGC CACCTCGACC GGCAATCCAA GGATCGGCGA GGTTGCTGTT TGTCGGCCGA CTTTCCCCCC GAAAGGGTCC CGCCATCGCG ATCCAGGCAT TGGCGCACCT GCGCCGTCGA GGAACGCCGG CCAGTCTGGA TGTGGTCGGT GATTCGTTTG CCGGCTATGA ATGGTTCGCT GACGAACTGA GGCGGTTGGT GCAGCTGGAG GGAGTGGCAG ACGCTGTGCG TTTTCATGGC TTCGTGTCGG ATATCTGGCG GCAAATGGCG CAGGCCGACG TCGTGCTGGT TCCGTCGCAG GCCGACGAGT CTTTCGGCAA CAGTGCGATC GAGGCCGTCC TGGGCGCCCG TCCGCTGGTG GTGACCCAGA TCCAGGGGCT ACTCGAGGCA ACCGAGGGAT TCGCGGCCGT GAAGTCGGTG CCTCCCGGTG ATGCCGATGC CCTGGCCGGC GGGATCGACG AGATCCTTTC CGAATGGTCG AGATTCGCCG AGCTGGCCGA ACGCGACGCC CGGATCGCCG TCGAGCGTTT CGCACCGGCC CGCTACCGCC GCGACATGCT GGCCCGGGTT GCCGGACTGG TCCGACCATG A
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Protein sequence | MPPVGSGSGR RALVVHPGAD LYGSDRVLLE TVGALVEAGW AVTVSVPAAG PLVAVLVHRG ASVQVCPTPV LRKSVLSPRG ALRLVGDTAR AIPSGAALIR RCQPDVVIAN TITIPLWTLL GRMLRRPVLV HVHEAEGSVS MVRQRVMAAP LLLATALVAN SRWTRDVLTR SFARLGPRTS VIYNGVAGPA SPVPPRPAIQ GSARLLFVGR LSPRKGPAIA IQALAHLRRR GTPASLDVVG DSFAGYEWFA DELRRLVQLE GVADAVRFHG FVSDIWRQMA QADVVLVPSQ ADESFGNSAI EAVLGARPLV VTQIQGLLEA TEGFAAVKSV PPGDADALAG GIDEILSEWS RFAELAERDA RIAVERFAPA RYRRDMLARV AGLVRP
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