Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4222 |
Symbol | |
ID | 8449848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4673366 |
End bp | 4674667 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645043271 |
Product | histidine kinase |
Protein accession | YP_003203500 |
Protein GI | 258654344 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0052969 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0674921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACGCC GGGTTCTGGT GTCGATCCTG CTGGTCATCG CGGCGACCGT TCTGACCCTG GGCGTCCCGC TCTCGATCGT CTCCTGGCGA GTCGTCGACG ACCTGATGCG CAGCGACCTG AACAGTCGCC TGGATTCGAT CGCCGCCTCG ATCGCCAACC AGTCCAGCTC GTCGGCCATC GATCTGGGGC AGTTGGCCGC GGCGGTGCCC TCCGGCGGCC GGCTGGACAT CACCATGGCC GGCCGGATCG ACCAGTCCAT CGGGACCACC TCAACCAGCC AGGTCTACTC CGAGCAACTG GCGATGGCCG GTGGCGGCAC CCTGCGGTTG TCGGTGCCAG AGAGCTATCT GCGGGCCGAG CAGTGGAAGG CGTTGGCGTT GGTCGCGCTG GCCATCGCGC TGTCCGTGGT GGTCGGTACT GGGGTCGCGG TGCTGACCGC TCGCCGCCTG GCGACCCCGT TGACCGATGT CGCGCGCCGG GCCGCCCGGC TGGGCTCGGG CGACTTCCGG ACCTTCCGGC GCCGGTACGA CATTCCGGAG CTGGACCGGG TCGCGGACGT CCTGGACTCC TCGGCGCACG ACATCTCCGC GCTGATCGCC CGGGAGCGGG ACCTGGCCGG TGACATCTCG CACCAGCTGC GGACCCGGCT CACCGGGTTG CGGTTGCGGC TGGAGGAGCT CGCCGAGTAC CCGGACGCCG ACGTGCAGCA GGAGGTGCAG GAGGCCCTGG AACAGACCGA TCGCCTGGTC ACGGTGGTCG ACGACCTGCT GGCCAATGCC CGGTCGCAGC GCGCGGCCGG GGCCAGCGAG TTGGAGCTGT TCGACGAGCT GGCCGAGATC GAGGCGGAGT GGGGGCCGGC GCTCACCGCG GCGGGCCGCA CGCTGACGGT GCGCTGCGGC CGGGACGTGC GGGTGCACGC CACTCCGGGG CGGCTGCGCG AGGCCATCGG GGTGTTGGTG GAGAACTCAC TGCGGCACGG CGCGGGCACG GTCGGGGTGC TGGTCCGGCC GGCCGGCCGG GGCTCGGGCG GCATGGTGGT GCTGGAAGTC AGCGACGAGG GGCCGGGCAT TCCCGAGGCA CTGGTCGCGC ACATCTTCGA TCGGGGGGTG TCGACCGCGT CGTCCACCGG GATCGGGCTG GGGCTGGCCC GGGCGTTCGT CGAGGCCGAC GGGGGACGGT TGGAGCTGCG GCGCGCCGTC CCGCTGACCT TCGCCATCTT CCTGGTGGTC AGCGAAGAAC CGTCCACGCC GGATGCGGAG GGCGACCGGG TGCCGGGGCC GGCCGGCGCC CCCGTCGGGT AG
|
Protein sequence | MQRRVLVSIL LVIAATVLTL GVPLSIVSWR VVDDLMRSDL NSRLDSIAAS IANQSSSSAI DLGQLAAAVP SGGRLDITMA GRIDQSIGTT STSQVYSEQL AMAGGGTLRL SVPESYLRAE QWKALALVAL AIALSVVVGT GVAVLTARRL ATPLTDVARR AARLGSGDFR TFRRRYDIPE LDRVADVLDS SAHDISALIA RERDLAGDIS HQLRTRLTGL RLRLEELAEY PDADVQQEVQ EALEQTDRLV TVVDDLLANA RSQRAAGASE LELFDELAEI EAEWGPALTA AGRTLTVRCG RDVRVHATPG RLREAIGVLV ENSLRHGAGT VGVLVRPAGR GSGGMVVLEV SDEGPGIPEA LVAHIFDRGV STASSTGIGL GLARAFVEAD GGRLELRRAV PLTFAIFLVV SEEPSTPDAE GDRVPGPAGA PVG
|
| |