Gene Namu_3977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3977 
Symbol 
ID8449596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4392307 
End bp4392843 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content72% 
IMG OID645043022 
ProductATP-cone domain protein 
Protein accessionYP_003203258 
Protein GI258654102 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.173663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTGTC CCTTCTGTCG CCATCCCGAT TCGCGGGTGA TCGACTCCCG CGAGGTCGAC 
GACGGACAAG CCATCCGTCG GCGGCGCTCG TGTCCGGAGT GCGGGCGCCG GTTCAGCACG
CTGGAAGGCG CGCTGCTGTC GGTGGTCAAG CGCAGTGGCG TCACCGAGCC GTTCAGCCGC
AGCAAGGTCA TCGCCGGGGT CACCCGGGCC TGCCAGGGCC GGCCGGTCGA CCCGGACGCG
ATCGCGCAGC TGGCCCAGCG GGTGGAGGAG ACGGTGCGCG GATCCGGCCA GGCCGAGTTA
CCGAGCCAGG ACGTCGGACT GGCCATCCTG GGACCGTTGC GCGACCTGGA CGAGGTGGCC
TACCTGCGGT TCGCCTCGGT CTACCGGTCG TTCACCTCGG CCGACGACTT CGCCGCCGAG
ATCAGGAGCA TGCGCGAGCA GGATGCGGGC ACCATCGCTC CCGACGCCGG GGCCGATGCC
GCCGGCGGTG GCACCGCACC GACGTCCGAC CGGTCACCGC CGGTCCCCAT CACCTAG
 
Protein sequence
MRCPFCRHPD SRVIDSREVD DGQAIRRRRS CPECGRRFST LEGALLSVVK RSGVTEPFSR 
SKVIAGVTRA CQGRPVDPDA IAQLAQRVEE TVRGSGQAEL PSQDVGLAIL GPLRDLDEVA
YLRFASVYRS FTSADDFAAE IRSMREQDAG TIAPDAGADA AGGGTAPTSD RSPPVPIT