| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3916 |
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| Symbol | |
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| ID | 8449535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4321569 |
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| End bp | 4323413 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 645042962 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_003203198 |
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| Protein GI | 258654042 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.3459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0290883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGGCGCC CGCTGACCGC CCCGGGCAGC GCCCACCTGG GCGCCACGGA CGGGGTCGCG
TACCTGCTGG ATCTGCTGGC CCGGGACGCC TCCGCGGTCG AATTCGAGCG CCCGGTCGTC
GAGGCCCGCA CCGCCGGGTT GCCGGCCGCC GACATCGACG CGCTGGAACG GGCCAAGCAG
GTCGCCCTGG GCGTGCGCGA GCAGTTGCAG TCGCATCGCC GCCGCGAGGC CGAGCTGGCC
GCCCTGTTCC AGACGGCCTC CGATCTGGCC GCTTTGTCCA GCGTCGACGA CGTCCTGGCC
GCCATCGTGC GGCGGGCGCG GGCCCTGCTC GGCCGGGACA CCGCCTACCT GTGCCTGAAC
GACGACGAGC GCGGCGACAC CTACATGCGG GTGACCGACG GGTCGGTGTC GGCCGAGTTC
CAGGCGGTTC GGTTGCCCTT GGGTGGTGGC CTGGGCGGGC TCGTCGCCCA GCAGGGTGTG
CCGATCGCCT CGGCGGACTA CTTTTCCGAC AGCCGGTTCC ACCATCTGAA CACGATCGAC
TCGGCCGTCC GGTCCGAGGG CCTGGTGTCC ATCCTCGGGG TGCCGCTCAA GCGCGGCGCC
CAGGTCATCG GCGTGCTCTT CGCGGCCGAC CGGCGGCGCC GGGCATTCTC CCGGGACGAG
GTCGCGCTGC TGTCCTCGCT GGCCGCGCAC GCCGCGGTGG CGCTGGACAA TGCCCGGCTG
CTGGCCGAGA CCCGTTCCGC GCTGATCAGT TTGGAACGGG CCAATGATTC GTTGCGGGAG
CAGAGCCGGG ATACCGAGCT GGCCGTGATC GCGCACGACC GGTTGGCCGA GCTCGTGCTA
CGCGGCGGCG GCGTCGCCGA GGTGGCCGCC GAGCTGGCCG ATGTGCTCGG CGGCTCGGTG
GAACTGCAAG GGCCGACGGA GATGTCGATC CCGCTGGCGC CGGGGCAGTG CTCCGTGCCG
GTGGCCACCG GATCGGAGCT GCTGGGTCGG CTGGTGCTCA CCCGGCCGAG CCAGACCCGC
GCGGCCGACC TGCGCGTGCT GGAACGCGGC GCGGTGGTGA CCGCGCTGCT GCTGCTGTTC
AACCGGCACC TGGCCGAGAT GGCCAACCGC GGGCGGCGGG ATCTGCTGGA GGACCTGCTC
ACCGGTTCGG TCACCGATGC CGACGAGATC AGTGCCCGCG CCGCCCATCT GGACGCCGAC
CTGACCGGCG AGCTGGTCGT CGTGGTCTGC GCGGTGCCCC GGCACCGGGT CGACTCCGAG
CAGGCGGCCG CGTTCTACGC CGGGCAACGC CGCGGTCTGT CGGCCCGGCT GGACGGGCAC
CTGGTGCTGC TGGTCCCCGG GACCGATCCG GGGGCGGCCG CCCGGGAGGC GGCCACCGGT
CTGGCCCGGG TGCTCGGCGG ACCGGTCACT GCGGCGGGGG AGCAGGTGGC CGCCGGCCCC
TCCCGCGGGG CCGAGCTGGT GCGCGCGCAC CGGTCCGCCC GCCAGGGGCT GGCCGCCATG
CTGGCGCTGG GCCGGGAGGG TCAGGGGGCA ACGACCGCGG ACCTGGGCTT CGTCGGGGTG
CTGCTGTCCG CCGGTGACTC CGGCGCCCGC TTCGTGCAGG ACACCCTGGG CCCGGTGCTG
GACTACGACG CGGCCCGCGG GTCCGACCTG GCCGCCACCC TGGACGCCTG GTTCGGCGAG
GGTGGGCATC TGGGCCGTAC CGCCGCCGCC CTGCACCTGC ACCCGAACAC CGTGGGGCAG
CGACTGTCCC GGGTCGCCAC CCTGCTGGGC GACGACTGGA GGAACCCCGA CCGGGCGCTG
CAGGTGCAGC TGGCCCTGCA GTTGCGCAAG CTGCTGCCGG CCTGA
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| Protein sequence | MGRPLTAPGS AHLGATDGVA YLLDLLARDA SAVEFERPVV EARTAGLPAA DIDALERAKQ
VALGVREQLQ SHRRREAELA ALFQTASDLA ALSSVDDVLA AIVRRARALL GRDTAYLCLN
DDERGDTYMR VTDGSVSAEF QAVRLPLGGG LGGLVAQQGV PIASADYFSD SRFHHLNTID
SAVRSEGLVS ILGVPLKRGA QVIGVLFAAD RRRRAFSRDE VALLSSLAAH AAVALDNARL
LAETRSALIS LERANDSLRE QSRDTELAVI AHDRLAELVL RGGGVAEVAA ELADVLGGSV
ELQGPTEMSI PLAPGQCSVP VATGSELLGR LVLTRPSQTR AADLRVLERG AVVTALLLLF
NRHLAEMANR GRRDLLEDLL TGSVTDADEI SARAAHLDAD LTGELVVVVC AVPRHRVDSE
QAAAFYAGQR RGLSARLDGH LVLLVPGTDP GAAAREAATG LARVLGGPVT AAGEQVAAGP
SRGAELVRAH RSARQGLAAM LALGREGQGA TTADLGFVGV LLSAGDSGAR FVQDTLGPVL
DYDAARGSDL AATLDAWFGE GGHLGRTAAA LHLHPNTVGQ RLSRVATLLG DDWRNPDRAL
QVQLALQLRK LLPA
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