Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3786 |
Symbol | |
ID | 8449405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 4152344 |
End bp | 4154026 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645042837 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003203073 |
Protein GI | 258653917 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.398253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.51855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCT CCGCGTCCAC CGGCGCCGCT GCGGCCACCG CTCGTTCCGG GGCCGGTCTC GTCCTGGCCG TGCTGGCGGC CAGCCAGTTC CTGATGACGC TGGACAGTTC GGTGATGAAC GTGTCCATGC CCACCGTCGC CGCGGACCTG GGCACCACGA TCACCGGCAT CCAGACCGCG ATCACCATGT ACACGCTGGT GATGGCCACC CTGATGATCA CCGGCGGCAA GCTGGGCACG ATCATGGGCC GCCGCCGGGC CATGGGCATC GGCCTGGTCA TCTACGCGGC CGGCTCGTTC ACCACCGGCA TCGCCCAGAA CCTGACCCAG CTGCTGATCG GCTGGTCGCT GCTGGAGGGC ATCGGCGCGG CCCTGATCAT GCCGGCCATT GTGGCCCTGG TCGCCTCGAA CTTCCCGGCC GACAAGCGTT CGGCCGCCTA CGGTCTGGTC GCCGCGGCGG GTGCGGCCGC GGTCGCCGTC GGCCCGCTGA TCGGCGGCGC GGTCACCACC TACGCCTCGT GGCGGTACGT CTTCTTCGGC GAGGTCGTGA TCGTCCTGCT GATCCTGGCC GTGCTGCGCA AGCTCAACGA CGTGGCCCCG CAGCCCAGCC GGATCGACCT CTTCGGGTCG TTGCTGTCGG TGGTCGGCCT GGGTCTGTTC GTCTTCGGCG TGCTGCGCTC GAGCGAATGG GGCTGGGTGA TCGCCAAGCC GGGCGCACCG GCCCCGTTGA ACGTGTCGCT GACCATCTGG TGCATGGCCG GCGGGCTGCT GGTCGTCTAC GGCTTCCTGC GCTGGGAGAG CCGGCTGGAG GCCGCGGCCA AGGACGACCC GACGGCGCTG CAGCCGCTGC TGCGGCCCAG CATGCTGGCC AACCGGCAGC TGACCGGTGG CCTGGGCATG TTCTTCTCCC AGTTCATGAT CCAGGCCGGG GCGTTCTTCG CGGTCCCGCT GTTCCTGTCC GTGGTGCTGG GCCTGACCGC CATGCAGACC GGGGTGCGGC TGGTGCCGCT CTCGATCGCC CTGCTGGTCA CGGCGATCGG GGTACCCAAG GTGTGGCCCA AGGCCAACCC GCGGCGGGTG GTCCGGCTCG GGCTGCTGCT GATGATCATC GGGATCGGCT TCCTGGTCGC CGGCATGGAT CCGGACGCCG ACGCCAGCGT GATGACGATC CCGATGATCC TGATGGGCCT AGGCCTGGGC GCGCTGGCCT CCCAGCTCGG CGCGGTCACC GTGTCGGCGG TGTCCGAGAG CGAGACCGCC GAGGTCGGTG GCCTGCAGAA CACCGCGACC AACCTGGGCG CCTCGATGGG CACCGCGCTG ATCGGCTCAG TGCTCATCGC CACGCTGAGC AGTGCGGCGT TGACCGGGGT GGCCAGCAGC CCGGAGATCA ACGACGCGCT CAAGTCGCAG ATCTCCACCG AACTGGTCGG CGGGGTGCCG TTCGTCTCCG ACGAGCAGGT GGCGACCGCC CTGTCCGCGG CCGGGGTGAG CCAGTCCGAG ATCGATGCCA TCACCGAGAT CAACGCGCAG GCCCGGCTGG AGGCGCTGCA GGTGGCCTTC GCGCTGGTCG GCTTCATCGC CATCGGGGCG CTGTTCTTCT CCACCAAGCT GCCCACGGTC GCCCCCGGCT CGACGGTCGC GGCCGCCGGT CCCGACCCCA CCGGTCCGCC CAAGCGCGAC TGA
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Protein sequence | MTTSASTGAA AATARSGAGL VLAVLAASQF LMTLDSSVMN VSMPTVAADL GTTITGIQTA ITMYTLVMAT LMITGGKLGT IMGRRRAMGI GLVIYAAGSF TTGIAQNLTQ LLIGWSLLEG IGAALIMPAI VALVASNFPA DKRSAAYGLV AAAGAAAVAV GPLIGGAVTT YASWRYVFFG EVVIVLLILA VLRKLNDVAP QPSRIDLFGS LLSVVGLGLF VFGVLRSSEW GWVIAKPGAP APLNVSLTIW CMAGGLLVVY GFLRWESRLE AAAKDDPTAL QPLLRPSMLA NRQLTGGLGM FFSQFMIQAG AFFAVPLFLS VVLGLTAMQT GVRLVPLSIA LLVTAIGVPK VWPKANPRRV VRLGLLLMII GIGFLVAGMD PDADASVMTI PMILMGLGLG ALASQLGAVT VSAVSESETA EVGGLQNTAT NLGASMGTAL IGSVLIATLS SAALTGVASS PEINDALKSQ ISTELVGGVP FVSDEQVATA LSAAGVSQSE IDAITEINAQ ARLEALQVAF ALVGFIAIGA LFFSTKLPTV APGSTVAAAG PDPTGPPKRD
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