Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3592 |
Symbol | |
ID | 8449211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3946746 |
End bp | 3947627 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645042665 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003202901 |
Protein GI | 258653745 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0118916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.053603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGTT TGAGCCTCGG GATCCCCGGG GTGCGAGCTG TCAGCCCGGG AACGCACTTC TGCGCGCTCT ACTCGGGCCC GGCCGAGCGC GACCGGCTGT TGTTCCCGTT TCTCGAGGAG GGGCTGCGGT GCGGTGACAA GTGCCTGTGC CTGTGCCTGA TCGACGATGT GGAGCCGGCG CTGGTCCGGG ATCTCGCCTT GGGACAGCCC AGCCGGGATT ACTCCCGACG ATCGGCACAG CTCGACGTCG AACGGACATC GGACGCCTAC CTCCGCTCGG GGGAGTTCAG CGTCGCGGAC ATGATGAGCT TCCTCTGCGA GAGCGCGGAC GCGGCGATCG CAGACGACTT CGACCTTCTC CGGGCCGCCG GTGAGATGTC GTGGGTGCTG CCCGGGCCCC CGGGCTGGGA GGACCTGTTC CGCTATGAGT CGGCGCTCAA CCACGCCGTC GAACAGATGC CCGCCATCCT GATGTGCCTC TACGACCTGC AGAAGTTCGG GGCCCAGATG CTCGTCGAGG TGCTCCGCAC CCACCCCACG GTTCTGCTGG ACCGCACGGT CATCGACAAC CCCCACTACG TGCGCCCGAC CGAGTACCCG CCCCCCGCCA GTGCCACCTC CGGCACCCGG TATCCCTTGG TCAAGGTACG CGCGGACGGC GAGGATGGCG CGGGCCGCGG GTGGGCGTCG CTCACCGACG CCGAGCGGCG CGTCGTCTCC TGGGTGGCTG GGGGGATGAC CAACCGCAGG ATCGCGGAGG AGCTCCACCT TTCCCGCCAC ACTGTGGACG CCCATCTCAA GCACGTCTAC GTCAAGCTCG ACATCCACTC TCGAGTGGAG CTGACCGTGC TGGCTATGCA GCACCGCGCC CACGTGGGCT AG
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Protein sequence | MNGLSLGIPG VRAVSPGTHF CALYSGPAER DRLLFPFLEE GLRCGDKCLC LCLIDDVEPA LVRDLALGQP SRDYSRRSAQ LDVERTSDAY LRSGEFSVAD MMSFLCESAD AAIADDFDLL RAAGEMSWVL PGPPGWEDLF RYESALNHAV EQMPAILMCL YDLQKFGAQM LVEVLRTHPT VLLDRTVIDN PHYVRPTEYP PPASATSGTR YPLVKVRADG EDGAGRGWAS LTDAERRVVS WVAGGMTNRR IAEELHLSRH TVDAHLKHVY VKLDIHSRVE LTVLAMQHRA HVG
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