| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3555 |
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| Symbol | |
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| ID | 8449174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3906189 |
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| End bp | 3907142 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645042632 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003202868 |
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| Protein GI | 258653712 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0003326 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00163359 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATCCAGG CCGGTCACGC CGGGCTCATC CCTGCCCAGA TCGCTCGGCA GATCGGCCGG
CACCGGGCCA CGGTGTGTCG GGAACTGGCT CGTAACCAGG GGCCGGACGG GACGTATTAC
GCCTCGATCG CACACGTCAA GGCCGCGAAC CGGCGCCGCC GACCCAAATC GTTCAAGCTG
CGGAGCAATC CCCGGTTGTG CCGGCAGATC GAGCTCTACA TGGACCAGGG GTGGAGCCCG
GGGTTGATCG CCCAGGTGTT GGCGATCGAC CATGCCAGCA ACCAGGCTTG GCGGGTGTCC
CACGAGACGA TCTACCAGTG CCTGTACGTG CAGACCCGCG GCCTGTTACG CGCTGACCTG
CACCAACAGC TCAGCCTCAA ACGGTCGGCG CGGGTCTCCC GGACCGGCAC CCGGCGCGAC
CCGAGCCCGT TCAAGCAGGC GTACACGATC AGCGACCGGC CGGCCGAGGC GGACGACCGG
GCCGTGCCCG GCCACTGGGA GGGCGACCTG ATCGTGGGCA AGAACAACGG ATCGGCGATC
GGCACACTGG TCGAGCGGTC GTCCCGGTTC ACCATCTTGT TGCACCTGCC CGGCCGGCAC
ACCGCCGACG AGGTCGCCGC CGCGATGATC GCCCAGATGC GTCGCCTGCC CGAACACCTG
CGCCGGTCGG TCACCTGGGA CCGCGGCGTC GAGCTCGCCG CCTACCGGGA CATCCAGCTG
GCCCTGGACA CCACCCTGTA TTTCTGCGAT CCGCGTTCAC CGTGGCAACG CGGCACGAAC
GAGAACACCA ACCGGCTGCT GCGGCACTGG TTCGCCAAAG GCACTGACCT GTCCGTGCAC
ACCGCCGCCG ACCTCAAACG AGTCCAGGAC TCGCTCAACC AACGCCCCCG CCCGACGCTG
GGCCTCAGGA CCCCAGCCCA AGCCATGGCC CAGTTCCTGG CCCAGGCCGC CTAA
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| Protein sequence | MIQAGHAGLI PAQIARQIGR HRATVCRELA RNQGPDGTYY ASIAHVKAAN RRRRPKSFKL
RSNPRLCRQI ELYMDQGWSP GLIAQVLAID HASNQAWRVS HETIYQCLYV QTRGLLRADL
HQQLSLKRSA RVSRTGTRRD PSPFKQAYTI SDRPAEADDR AVPGHWEGDL IVGKNNGSAI
GTLVERSSRF TILLHLPGRH TADEVAAAMI AQMRRLPEHL RRSVTWDRGV ELAAYRDIQL
ALDTTLYFCD PRSPWQRGTN ENTNRLLRHW FAKGTDLSVH TAADLKRVQD SLNQRPRPTL
GLRTPAQAMA QFLAQAA
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