Gene Namu_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3401 
Symbol 
ID8449016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3738333 
End bp3739058 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content73% 
IMG OID645042478 
Productprotein of unknown function DUF161 
Protein accessionYP_003202718 
Protein GI258653562 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00000395901 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000885449 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGTGT TGACCCCCAT TCCGCCCGAC CGCCGGGTCC GCCGGTTCAG CCAGCTGCTG 
GGCGGGTTAC TGCTCTACGG CTTCACCATG GGGCTGATGG TCCGCGCCGT GCTCGGCCTG
GATCCGTGGG ACGTGTTCCA CCTCGGGCTG ACCGAGCTGG TCAACCGGTG GGTGCCGCTG
TCCTACGGTG CGGTGATCAC CATCGTCTCG GTGCTGGTCC TGCTGCTGTG GATCCCGCTG
CGGCAACGGC CGGGCGTCGG CACCATCGCC AACGCCGCGA TCATCGGGTT TGCCGTGGAC
GCCACCCTGT GGTTGATCCC GCCGGTGGAC AACCTGGCCG TGCGGATCGG CCTGCTGGTC
GTCTCGGTGG TCGGCAACGC GCTGGCCGGC GCCCTGTACA TCGGGGCCGG CCTGGGCCCC
GGCCCGCGGG ACGGTCTGAT GACCGGTCTG GTCGCCCGCG GCGTCGGCTC GGTCCGGGTG
GTCCGCACCG TGATCGAGCT GTCCGTGCTC GGCATCGGCT GGCTGCTCGG CGGGGTGGTC
GGCGTCGGCA CCGTGGTCTA CGCGGTGGCC ATCGGCCCGC TGCTGCACCT GCTGCTGCCC
CGGGTTCAGG TCCGCTCCGC GGCGCTGCCC GAGCGGGTGG CCGTGCCCTC CGGCGGGCCG
GCCGCGCCGG TCGCTCCGAC CCGCCCGGTC GCCGACGCGC CGTTCACCGA GGCCGAGGGT
CGCTGA
 
Protein sequence
MRVLTPIPPD RRVRRFSQLL GGLLLYGFTM GLMVRAVLGL DPWDVFHLGL TELVNRWVPL 
SYGAVITIVS VLVLLLWIPL RQRPGVGTIA NAAIIGFAVD ATLWLIPPVD NLAVRIGLLV
VSVVGNALAG ALYIGAGLGP GPRDGLMTGL VARGVGSVRV VRTVIELSVL GIGWLLGGVV
GVGTVVYAVA IGPLLHLLLP RVQVRSAALP ERVAVPSGGP AAPVAPTRPV ADAPFTEAEG
R