Gene Namu_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3388 
Symbol 
ID8449003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3726071 
End bp3727279 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content75% 
IMG OID645042465 
Producthistidine kinase 
Protein accessionYP_003202705 
Protein GI258653549 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000377733 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000242442 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGTGGT GGCCGAGGGC AGGCAGCTGG CTGCGCGCCC ACCCCACCCT GCTGGACGGG 
TTGCTGGCGC TGCTGGTCAT GGGGCCGGCC TTCGCCGGCC GGGTGAACGT GCTCCCCGGA
ACGCCGATCA CCCCGACCGC GGTGTCCCAG GTGCTGGTGG TCGTCGCCTG CCTGGCCCTG
ACGGTCCGCC GGCGCTGGCC GGTGCCGGTC TGGCTGGTCA CCCTGACGGC GGGTGTCGCG
GTGATCCTGC TGCAGCAGGG CCCGTCGCCG GCCCTGCTGC CGCTGCTCGT CGCCCTGTAC
ACGGTGGCGA CCCGCTGGCC GGTGGCGCGG GCGCTGCTGG CGGCCGCGGG GTCGGCCGGA
CTGCTGCTGC TCGCCCAGGG TTTCGCCACG GCCGACCGCT GGGATCGGCC GACGACCTAC
GTCGTTGCGA CCTGGTGCGT CCTGTCGGCC GTGGTCGGTA TCTCAGTGCG GCAACAGCGA
CTGGCCCTGG CCCAGGCGCG CGAGCGGGCC CGGGTGGCCG AGGAGTCCCG TGAGGAGGAG
GCGCAGCGCC GGGTGACCGA GGAACGGCTG CGGATCGCCC GCGAGCTGCA CGACGTGGTG
GCCCACCAGA TCGCGGTGAT CAACGTGCAG TCCGGGGTCG CCGAACACCT GCTGCCGGTG
AATCCCGAGC GGGCCGCGGA GGCCCTGCGG CACGTCCGGG AGGCCAGCTC CCAGGTGCTG
ACCGAGATGG GCACGCTGCT GGGCGTGCTC CGCGGTGCCG ATTCCGACGA GGCGGATCGG
GAGCCAGCGC GCGGGCTGGC CGAGCTGGAT CAGCTGGTGG CGTCGCTGCG CCGCACCGGA
CTGCAGATCG TCTTCCGGCA GGAGGGAACG CCCGTTCCGC TGGGCCCGTT GGTCGACGTC
ACCGCGTACC GGATCGTCGA GGAGGCACTG ACCAACGCCC ACAAGCACGG GGCCGGCACT
GCGCGCCTGC TGTTTGCCTT CCGGCCGCCC GGGCTGGTCG TCGAGGTGGA CAACCCGGTC
GAGCCCGGCC TTTCCCGGGC CGCCGGTTCC GGGCGGGGGC TGGCTGGCAT GTACGAGCGG
GTCGCCGCCA TCGGCGGCGG CCTCCGGGCC GGGCCGGCCG GCCGCGACCG GTTCACCGTC
CGCGCGGAGC TGCCCGCCGC GGGCCGGCCG GCCGTCACCG GGCCGGCGGT CGAGGCGGTG
CCGTCGTGA
 
Protein sequence
MTWWPRAGSW LRAHPTLLDG LLALLVMGPA FAGRVNVLPG TPITPTAVSQ VLVVVACLAL 
TVRRRWPVPV WLVTLTAGVA VILLQQGPSP ALLPLLVALY TVATRWPVAR ALLAAAGSAG
LLLLAQGFAT ADRWDRPTTY VVATWCVLSA VVGISVRQQR LALAQARERA RVAEESREEE
AQRRVTEERL RIARELHDVV AHQIAVINVQ SGVAEHLLPV NPERAAEALR HVREASSQVL
TEMGTLLGVL RGADSDEADR EPARGLAELD QLVASLRRTG LQIVFRQEGT PVPLGPLVDV
TAYRIVEEAL TNAHKHGAGT ARLLFAFRPP GLVVEVDNPV EPGLSRAAGS GRGLAGMYER
VAAIGGGLRA GPAGRDRFTV RAELPAAGRP AVTGPAVEAV PS