Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3388 |
Symbol | |
ID | 8449003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3726071 |
End bp | 3727279 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 645042465 |
Product | histidine kinase |
Protein accession | YP_003202705 |
Protein GI | 258653549 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000377733 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000242442 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACGTGGT GGCCGAGGGC AGGCAGCTGG CTGCGCGCCC ACCCCACCCT GCTGGACGGG TTGCTGGCGC TGCTGGTCAT GGGGCCGGCC TTCGCCGGCC GGGTGAACGT GCTCCCCGGA ACGCCGATCA CCCCGACCGC GGTGTCCCAG GTGCTGGTGG TCGTCGCCTG CCTGGCCCTG ACGGTCCGCC GGCGCTGGCC GGTGCCGGTC TGGCTGGTCA CCCTGACGGC GGGTGTCGCG GTGATCCTGC TGCAGCAGGG CCCGTCGCCG GCCCTGCTGC CGCTGCTCGT CGCCCTGTAC ACGGTGGCGA CCCGCTGGCC GGTGGCGCGG GCGCTGCTGG CGGCCGCGGG GTCGGCCGGA CTGCTGCTGC TCGCCCAGGG TTTCGCCACG GCCGACCGCT GGGATCGGCC GACGACCTAC GTCGTTGCGA CCTGGTGCGT CCTGTCGGCC GTGGTCGGTA TCTCAGTGCG GCAACAGCGA CTGGCCCTGG CCCAGGCGCG CGAGCGGGCC CGGGTGGCCG AGGAGTCCCG TGAGGAGGAG GCGCAGCGCC GGGTGACCGA GGAACGGCTG CGGATCGCCC GCGAGCTGCA CGACGTGGTG GCCCACCAGA TCGCGGTGAT CAACGTGCAG TCCGGGGTCG CCGAACACCT GCTGCCGGTG AATCCCGAGC GGGCCGCGGA GGCCCTGCGG CACGTCCGGG AGGCCAGCTC CCAGGTGCTG ACCGAGATGG GCACGCTGCT GGGCGTGCTC CGCGGTGCCG ATTCCGACGA GGCGGATCGG GAGCCAGCGC GCGGGCTGGC CGAGCTGGAT CAGCTGGTGG CGTCGCTGCG CCGCACCGGA CTGCAGATCG TCTTCCGGCA GGAGGGAACG CCCGTTCCGC TGGGCCCGTT GGTCGACGTC ACCGCGTACC GGATCGTCGA GGAGGCACTG ACCAACGCCC ACAAGCACGG GGCCGGCACT GCGCGCCTGC TGTTTGCCTT CCGGCCGCCC GGGCTGGTCG TCGAGGTGGA CAACCCGGTC GAGCCCGGCC TTTCCCGGGC CGCCGGTTCC GGGCGGGGGC TGGCTGGCAT GTACGAGCGG GTCGCCGCCA TCGGCGGCGG CCTCCGGGCC GGGCCGGCCG GCCGCGACCG GTTCACCGTC CGCGCGGAGC TGCCCGCCGC GGGCCGGCCG GCCGTCACCG GGCCGGCGGT CGAGGCGGTG CCGTCGTGA
|
Protein sequence | MTWWPRAGSW LRAHPTLLDG LLALLVMGPA FAGRVNVLPG TPITPTAVSQ VLVVVACLAL TVRRRWPVPV WLVTLTAGVA VILLQQGPSP ALLPLLVALY TVATRWPVAR ALLAAAGSAG LLLLAQGFAT ADRWDRPTTY VVATWCVLSA VVGISVRQQR LALAQARERA RVAEESREEE AQRRVTEERL RIARELHDVV AHQIAVINVQ SGVAEHLLPV NPERAAEALR HVREASSQVL TEMGTLLGVL RGADSDEADR EPARGLAELD QLVASLRRTG LQIVFRQEGT PVPLGPLVDV TAYRIVEEAL TNAHKHGAGT ARLLFAFRPP GLVVEVDNPV EPGLSRAAGS GRGLAGMYER VAAIGGGLRA GPAGRDRFTV RAELPAAGRP AVTGPAVEAV PS
|
| |