Gene Namu_3376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3376 
Symbol 
ID8448991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3715283 
End bp3716482 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content73% 
IMG OID645042453 
Productglycosyl transferase group 1 
Protein accessionYP_003202693 
Protein GI258653537 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000624508 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000924483 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCATGC GCTTCGGTTT CATCAGCACC TATCCGCCGA CCCAGTGCGG TCTGGCTACC 
TTCACCGCTT CGTTGTCCGG CGCCCTGACG GCCGGCGGCA CGGCCGAGTC CCGGATCGCC
CGGCTGCTGG AGAGCGCGCC GGCCGCGCAC CGCGGTCGCG AGGCCGTCGG CGACGGTGTC
GGCGGTGTCG GCGGTGTCGA CATTGTCGCC GGTGACCCGC GGACCGCAGC CCGCTCGATC
GACCGTCTGA ACCGGTGCGA CGTGGTCATC GTCCAGCACG AGTTCGGCAT CTACGGCGGA
CCGGACGGCG ACGAGGTCCT CGCCCTGCTG GCCGGCCTGA CCGTGCCCAC CATCGTCGTG
CTGCACACCG TGCTGACCGA GCCGACCGCC CACCAGCGGA TCGTGCTGGA CGGTGTGCTG
GCCGCCGCCG GCGCCGTCGT CACCATGTCC GAGACCGCGC ACCGCCGGCT GCTGACCGGC
TACCGGGTCG ACCCGGCCAA GGTCGGCGTG ATCGCCCACG GCGCGCCCGA GTCGACCTTC
CCGGTGCCCG TGCCGGCCGC GACCCCGACG ATCGGCACCG CAGGTACCGA CACCGAGACC
GACACGCCGA CCGTGCTGAC CTGGGGCCTG CTCGGCCCCG GCAAGGGCAT CGAGTGGGGC
ATCGAGGCAA TGGCCCACCT CAAGGACCTG CGCCCGTCGA TCCACTACGT GGTCGCCGGG
CAGACCCACC CGAAGGTGCT GCTGCACCAG GGCGAGCAGT ACCGCGAGGG CCTGCAGCGG
CGGATCGAAC GCCGGTCGCT GACCGGGTCG GTGCACCTGG AGGGCCGGTA CCTGGACACG
CCCACCCTGG CGTCCCTGGT CGCCGCCGCC GACGTGGTGC TGCTGCCCTA CGACTCGACC
GAACAGGTCA CCTCCGGGGT GCTCATCGAA GCGGTCGCCG CCGGCAAACC CGTGGTGGCG
ACCCGCTTCC CGCACGCCGT CGAGCTGCTC TCGGGGGGCG CCGGCATCGT GGTCCCGCAC
CGCGACCCGG TCTCCATCGC CGAGGGTCTG CGCCGGGTGA TCACCAGCCC GGAGCTGGCC
GCGAGCATGT CCCGGGCGGC CGCGGCCGCG GCGCCCGACC TGCGGTGGTC CGCGGTGGCC
AAGCAGTACC GCTTCCTGGC CGAACGGCTG ATCGCCCAGG CCGGCGTGGT GGCCGCGTGA
 
Protein sequence
MPMRFGFIST YPPTQCGLAT FTASLSGALT AGGTAESRIA RLLESAPAAH RGREAVGDGV 
GGVGGVDIVA GDPRTAARSI DRLNRCDVVI VQHEFGIYGG PDGDEVLALL AGLTVPTIVV
LHTVLTEPTA HQRIVLDGVL AAAGAVVTMS ETAHRRLLTG YRVDPAKVGV IAHGAPESTF
PVPVPAATPT IGTAGTDTET DTPTVLTWGL LGPGKGIEWG IEAMAHLKDL RPSIHYVVAG
QTHPKVLLHQ GEQYREGLQR RIERRSLTGS VHLEGRYLDT PTLASLVAAA DVVLLPYDST
EQVTSGVLIE AVAAGKPVVA TRFPHAVELL SGGAGIVVPH RDPVSIAEGL RRVITSPELA
ASMSRAAAAA APDLRWSAVA KQYRFLAERL IAQAGVVAA