Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3368 |
Symbol | |
ID | 8448983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 3706917 |
End bp | 3707600 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 645042445 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003202685 |
Protein GI | 258653529 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00646565 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0258143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA CGCAGACCGC CCGGCTGTAC GAGCAGGTTC GGGAGGCGAT CCTGAGCCTG GAGATCACCC CGGGCGAGCG GCTATCCGAG CGCGGGCTGG AGGCGCGGTT CGGCGCCTCC CGCACCCCGG CCCACGCCGC GCTGATGCGG TTGGAGGCCG ACGGCCTGGT CCAGCGCGAG GGGCGGGGCT GGATGGTCTC GCCCATCGAC ATCGGCGAGA TCGAGGCGGT CGCCGAGTTT CGGGAGACGA TCGAGGTCGC GGCGGTGCGG CTGGCCGCCG AGCGTGCCAC CGACGCCGAT CTGGCCGGCC TGGACGAGCT GCTGCAGGCC GCCCGTCCGG TCCGCACCGA GGAGGACGGC GTGCGCTCCG GCGGCGACTT CCACGTCGAA CTGGTCGCGC TGGCCGGCAA CGCGTTCATG GTCGAGGCGG TGCGCGGCTG CCTGGTGCGG CTGGCCCGCA CCCGCTGGCT GGAGGTGCGC ACGCCACAGG CCCGCGAGGC GGCCTGGGCG CAGCACCACG CCATCGTCGC GGCGTTGCGA GCCCGGGACG CCGACCGCGC GGCCGAGCTG GTCCGCACCC ACATCCGGTC GACCAATGCG CGGCTGGTCG AGCGCCTCAC CGCCCAGGTC CAGCCGCTGC GGCTGCGCGG CCTGACCGTG GTCAGGGACG CCGATGCCGG CTGA
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Protein sequence | MSTTQTARLY EQVREAILSL EITPGERLSE RGLEARFGAS RTPAHAALMR LEADGLVQRE GRGWMVSPID IGEIEAVAEF RETIEVAAVR LAAERATDAD LAGLDELLQA ARPVRTEEDG VRSGGDFHVE LVALAGNAFM VEAVRGCLVR LARTRWLEVR TPQAREAAWA QHHAIVAALR ARDADRAAEL VRTHIRSTNA RLVERLTAQV QPLRLRGLTV VRDADAG
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