Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3363 |
Symbol | |
ID | 8448978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3701364 |
End bp | 3702230 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 645042440 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003202680 |
Protein GI | 258653524 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00021305 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0157445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCG CCGTCATCAC CATCGCCGCC GGCCGGCACC AGCACCTGTG GGCCCAGCAG CGGGGGCTGG CCCTGGGCGA TCGGCGACCG GACGTCTACG TGGCCGTGGC CATGGGCGAC CCGCAGGTCG GTCCCCGAAC CGTCGACGGG CCGCTGACCG GCACCGGCGC CCTCGTGCTG CCGGTCGAGC TGGCCGCGGG TGGGCCGCTG CCGCTGGCCG CCGCCCGCAA CGCCGGCGCC GCCGCGGCGC TGGCCGCGGG CGCCGATGTG CTGATCTTCC TGGACGTGGA CTGTGTGCCC GCGCCGGCAT TGGTGGCCGC CTACACCGAC GCCGTGCACC ACGAGTCGGG GCCGGCCTTG CACTGCGGCG TGGTGCAGTA CCTGGCCGAC GGGGTCGACG CCGCCGGCAT TCATCCCGCC GACCTGGCCG GCCGGGCCCA CCCGGCCCGG CCGCAGCCCG GGCCGGGTGA GTCGTTGGAA TCGGCGGACT GGCCGCTGTT CTGGTCGCTG TCGTTCGCGG TCTCGGCCCG CACCTGGGCG CAGCTGGGCG GGTTCTGCGA GGAGTACGTC GGTTACGGCG GCGAGGACAC CGATCTGGGC TACCGGGCGT TCCGCGCCGG CATCACCCTG CGCTGGCTGG GCGGGGCCGA CGCCTTCCAC CAGTACCACG AGTCGCCGTC CCCGCCGGTC GCGCATCTGG CCGACATCGT CCGCAACGCA ACGGTTTTCC ACCGCCGCTG GGGATTCTGG CCGATGCTGG GCTGGCTGCA GGCGTTCGCC GACCTGGGTC TGGCCCACTA TGACCAGGAC CGCGATCGCT GGCAGGTGCT CACGGCGGCG CCCGATGCCG TCCCCGCCGG AACGTGA
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Protein sequence | MTTAVITIAA GRHQHLWAQQ RGLALGDRRP DVYVAVAMGD PQVGPRTVDG PLTGTGALVL PVELAAGGPL PLAAARNAGA AAALAAGADV LIFLDVDCVP APALVAAYTD AVHHESGPAL HCGVVQYLAD GVDAAGIHPA DLAGRAHPAR PQPGPGESLE SADWPLFWSL SFAVSARTWA QLGGFCEEYV GYGGEDTDLG YRAFRAGITL RWLGGADAFH QYHESPSPPV AHLADIVRNA TVFHRRWGFW PMLGWLQAFA DLGLAHYDQD RDRWQVLTAA PDAVPAGT
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