Gene Namu_3215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3215 
Symbol 
ID8448829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3545107 
End bp3546324 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content69% 
IMG OID645042294 
Productbeta-lactamase 
Protein accessionYP_003202535 
Protein GI258653379 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000372743 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00147977 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTCCGAC GCTCGCGTCG AGGGGTGATG GTGGCTGCCA TGGCCGGCCC GCTCCTGCTG 
GCGGCCTGCT CAAGCGCGGC ACCCGCGGTC TCGCCATCGG TCTCACCATC TGCCTCGGCG
GCCGCGTCTG CGTCCGTGTC GGCCTCTACG GCGGCCGCCG TCCAGCTCGA CGAGGCCACC
AGGAGCCGGC TGCAGGCCGG GTTCGCGCAG ACGTTCGCCG GCGGCACCGT CGGCGGCGTG
GCGACACCGG GGGCGGTCGC GTATGTCTCC GTCGGCGATC AGGTGTGGAC CAGCGCATTG
GGCGTCTCCG ACGTCGCGAC GCAGACGCCC ATCGATCCGG CCGGCCACGG CCGCATCGGC
AGCATCACCA AGCCGATCGT CGCCACCGCG GTGCTGCGGC TGGTCGACCA GGGTTCGCTG
TCGCTGGATG ACACCCTGGG CACCTACATT CCGGGCATCG CCAACGGCGA TCGCATCACC
GTGCGGCAGT TGCTCTCGAT GTCGTCCGGG GTCTGGAACT ACACCACCGA CCAGTCGCTG
CTGGACACCT TCGAGGCCGA CCCGATGGCG GCGTGGACGG TCGACCGGAC CATCGACCTC
ATCCGGGCCC AGCCCGCGGC CTTCGAGCCG GGCAGCAAGG TCGCCTACTG CGACTCCAAC
TACGTGCTGC TCGGCCGGAT CGCCGAGTTG GTGACCGGAA AGCCCATCAG CGAGGTCGTC
CGCACCCTGG TCACCGAGCC GTTGGGCCTG ACCGGCACGC GGATGCCCGC CGACGACGAG
CCCGGCGTGC CCGATCCGAG CCTGGGCAGC TACCTGCCGG TCAACGGTCA GCTGGTCGCC
GAACCGGACT TGAATCCGGA CTTCGCCTGG ACCGCAGGCG CGGCCACCTC CACCGTCGGC
GACCTGGCCC GATTCGCGCG AGAGCTGACC GACGGCTCCC TGCTCTCACC GCAGTTGCAG
GCGCAGCGGC TGCAGACCGC TCAGTTCACC GGCATCGACC TCAACGTCGG GTACGGGCTC
GGCCTGCTGA ACATGAACGA CCTGATCGGG CACAACGGCG ACATCAACGG CGGTGGCGGG
ACCATGCTGC GACTGCCCGA GCAGGACGCG ACATTCGTGG TCCTGGTCAA TCTGTCGACG
AATTCCGAGA ATGCGTCGGG TGCGATCGCC AACGAGCTCA TCGATCAGCT GTATCCCGGT
CAGTCCGTGC ACCGGTGA
 
Protein sequence
MVRRSRRGVM VAAMAGPLLL AACSSAAPAV SPSVSPSASA AASASVSAST AAAVQLDEAT 
RSRLQAGFAQ TFAGGTVGGV ATPGAVAYVS VGDQVWTSAL GVSDVATQTP IDPAGHGRIG
SITKPIVATA VLRLVDQGSL SLDDTLGTYI PGIANGDRIT VRQLLSMSSG VWNYTTDQSL
LDTFEADPMA AWTVDRTIDL IRAQPAAFEP GSKVAYCDSN YVLLGRIAEL VTGKPISEVV
RTLVTEPLGL TGTRMPADDE PGVPDPSLGS YLPVNGQLVA EPDLNPDFAW TAGAATSTVG
DLARFARELT DGSLLSPQLQ AQRLQTAQFT GIDLNVGYGL GLLNMNDLIG HNGDINGGGG
TMLRLPEQDA TFVVLVNLST NSENASGAIA NELIDQLYPG QSVHR