Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3215 |
Symbol | |
ID | 8448829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3545107 |
End bp | 3546324 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645042294 |
Product | beta-lactamase |
Protein accession | YP_003202535 |
Protein GI | 258653379 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000372743 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00147977 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTCCGAC GCTCGCGTCG AGGGGTGATG GTGGCTGCCA TGGCCGGCCC GCTCCTGCTG GCGGCCTGCT CAAGCGCGGC ACCCGCGGTC TCGCCATCGG TCTCACCATC TGCCTCGGCG GCCGCGTCTG CGTCCGTGTC GGCCTCTACG GCGGCCGCCG TCCAGCTCGA CGAGGCCACC AGGAGCCGGC TGCAGGCCGG GTTCGCGCAG ACGTTCGCCG GCGGCACCGT CGGCGGCGTG GCGACACCGG GGGCGGTCGC GTATGTCTCC GTCGGCGATC AGGTGTGGAC CAGCGCATTG GGCGTCTCCG ACGTCGCGAC GCAGACGCCC ATCGATCCGG CCGGCCACGG CCGCATCGGC AGCATCACCA AGCCGATCGT CGCCACCGCG GTGCTGCGGC TGGTCGACCA GGGTTCGCTG TCGCTGGATG ACACCCTGGG CACCTACATT CCGGGCATCG CCAACGGCGA TCGCATCACC GTGCGGCAGT TGCTCTCGAT GTCGTCCGGG GTCTGGAACT ACACCACCGA CCAGTCGCTG CTGGACACCT TCGAGGCCGA CCCGATGGCG GCGTGGACGG TCGACCGGAC CATCGACCTC ATCCGGGCCC AGCCCGCGGC CTTCGAGCCG GGCAGCAAGG TCGCCTACTG CGACTCCAAC TACGTGCTGC TCGGCCGGAT CGCCGAGTTG GTGACCGGAA AGCCCATCAG CGAGGTCGTC CGCACCCTGG TCACCGAGCC GTTGGGCCTG ACCGGCACGC GGATGCCCGC CGACGACGAG CCCGGCGTGC CCGATCCGAG CCTGGGCAGC TACCTGCCGG TCAACGGTCA GCTGGTCGCC GAACCGGACT TGAATCCGGA CTTCGCCTGG ACCGCAGGCG CGGCCACCTC CACCGTCGGC GACCTGGCCC GATTCGCGCG AGAGCTGACC GACGGCTCCC TGCTCTCACC GCAGTTGCAG GCGCAGCGGC TGCAGACCGC TCAGTTCACC GGCATCGACC TCAACGTCGG GTACGGGCTC GGCCTGCTGA ACATGAACGA CCTGATCGGG CACAACGGCG ACATCAACGG CGGTGGCGGG ACCATGCTGC GACTGCCCGA GCAGGACGCG ACATTCGTGG TCCTGGTCAA TCTGTCGACG AATTCCGAGA ATGCGTCGGG TGCGATCGCC AACGAGCTCA TCGATCAGCT GTATCCCGGT CAGTCCGTGC ACCGGTGA
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Protein sequence | MVRRSRRGVM VAAMAGPLLL AACSSAAPAV SPSVSPSASA AASASVSAST AAAVQLDEAT RSRLQAGFAQ TFAGGTVGGV ATPGAVAYVS VGDQVWTSAL GVSDVATQTP IDPAGHGRIG SITKPIVATA VLRLVDQGSL SLDDTLGTYI PGIANGDRIT VRQLLSMSSG VWNYTTDQSL LDTFEADPMA AWTVDRTIDL IRAQPAAFEP GSKVAYCDSN YVLLGRIAEL VTGKPISEVV RTLVTEPLGL TGTRMPADDE PGVPDPSLGS YLPVNGQLVA EPDLNPDFAW TAGAATSTVG DLARFARELT DGSLLSPQLQ AQRLQTAQFT GIDLNVGYGL GLLNMNDLIG HNGDINGGGG TMLRLPEQDA TFVVLVNLST NSENASGAIA NELIDQLYPG QSVHR
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