Gene Namu_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3193 
Symbol 
ID8448807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3516337 
End bp3517365 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content65% 
IMG OID645042273 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003202514 
Protein GI258653358 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000177376 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000622856 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCATCT TGGTGACCGG TACCGAGGGG TACCTCGGGT GCCTGCTGGC TCCGGAACTG 
GCCCGGCGTG GCCATGACGT GGTCGGGCTG GACACCGGAT TCTTCAAGTC CGGATGGCTG
TATCGGGGCA CCGACCGCAC GGTCTTGACT CTTGATAAAG ATGTCCGGAG TGTGCAGGCC
GAGGACCTTG TCGGATTCGA CGCGATCGTG CACATGGCGG AGCTGTCGAA TGATCCGCTC
GGCGACCTGC TCGGGGACGT GACCTACGAC GTCAATCACA AGGGCACGCT CCGGCTCGCC
ACGCTGGCGA AATCGGCCGG GGTACAACGG TTCATCCACA TGTCCTCGTG CAGTGTCTAT
GGGGTGGCGG ACGGCGTCGT CGACGAGAGC TCGCCGATCA ACCCCCAGAC GGCGTACGCC
GACTGCAAGG CATTGGTGGA ACGAGACGTC TCCGCGCTGG CGGATGATGC CTTTTCGCCC
ACTTTCATGC GCAACGCCAC CGCGTTCGGC GCATCCCCGA GGATGCGCTT CGACATCGTG
CTGAACAACC TGGCCGGGTT GGCCCACACC ACCGGCCGGA TCTCCATGAC CTCGGACGGA
ACTCCGTGGC GGCCGCTGGT GCACGCCATG GACATCGGCA AGGCGATTCG CTGCGCGTTG
GAGGCGCCGC GAGACGTCGT GCACAACGAG GTTTTCAACG TCGGCAGCAA CGAGCAGAAC
TACCAGGTGC GTGAGATCGC CGAGCAGGTG GCCGCCGCGT TCCCCGGATG CGTGACCGAG
TTCGGCCCGC CCGGACCGGA CAACCGGAGC TACCGGGTCA ATTTCGACAA GATCCACGCC
CAGCTCCCCG GCTTCGAGTG CGACTGGAAT GCCTCCCGCG GGGCCGAGCA ACTGGCGCGG
ATCTTCTCCT CGATCGACCT GGATGCCGAA ACCTTCACCG GTCGCGGGCA CACCCGGCTC
AAGCAGCTCG AGTACCTGCT GCGCACGAAA CAGATTGACG CCGAACTTCT CTGGACGGCG
GCCCGATGA
 
Protein sequence
MRILVTGTEG YLGCLLAPEL ARRGHDVVGL DTGFFKSGWL YRGTDRTVLT LDKDVRSVQA 
EDLVGFDAIV HMAELSNDPL GDLLGDVTYD VNHKGTLRLA TLAKSAGVQR FIHMSSCSVY
GVADGVVDES SPINPQTAYA DCKALVERDV SALADDAFSP TFMRNATAFG ASPRMRFDIV
LNNLAGLAHT TGRISMTSDG TPWRPLVHAM DIGKAIRCAL EAPRDVVHNE VFNVGSNEQN
YQVREIAEQV AAAFPGCVTE FGPPGPDNRS YRVNFDKIHA QLPGFECDWN ASRGAEQLAR
IFSSIDLDAE TFTGRGHTRL KQLEYLLRTK QIDAELLWTA AR