Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3109 |
Symbol | |
ID | 8448723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3431030 |
End bp | 3431863 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645042190 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_003202431 |
Protein GI | 258653275 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000000003676 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00451842 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGCCC AGAGTGGATC GCGCGCCGGC CGCAACCTGC CGATGGCGAT CGGCGTGGGT GTCGGTCTGG GCGGCATCGC CCTGCTGTCG CTGCTGACCT ACCGGATCAC CTTCCTGATC GTGATCGCCG CGGCGGTCGC GGTGTCGGTG TGGGAGCTGC AGGGCACCTT GTTGCGGGCC CGCGGTCTGC GGATCAGCTG GATCCCGGTG GCCGCCGGGT CGGTGGCCAC GATGGCCCTG GCCTGGCCTT ACGGTCCGGC CGCCCTGGGC ATCGGGATCG CCGCCACCAC CCTGCTGTGC ATGGTGTGGC GGTTCCGGCT GGGCGCCGAT GGCTATCTGG CCGACCTGTC GGCGTCGGTG TTCGTCACCG TCTACATCGG CCTGTTCGCC GGCTTCGCCA CCCTGATGCT GGTGCCCGCC GACGGCGCCC AGCGCATCCT GACCTTCCTG ATCCTGGTGG TGGCCAATGA TGTCGGCGGC TACGCCGCCG GCGTGCTGGC CGGTAAACAC CCGATGGCGC CGACCATCTC GCCCAAGAAG TCTTGGGAGG GCTTCGGCGG GTCGCTGGCC GCCTGCATGC TGGCCGGTGC GCTGTGCGTC TGGCTGCTGC TGGGTGGGCA CTGGTGGGTC GGGCTGCTGC TCGGCGTCGC CATCGCCGTC ACCGCCACCG TCGGCGACCT GACCGAGTCG CTGATCAAGC GGGACCTCGG GGTCAAGGAC ATGGGCACCC TGCTACCCGG GCACGGCGGC CTGATGGACC GGATGGATTC GCTGCTGCCC TCCGCCGTGG TGACCTGGGC GTTGCTGACC GTGCTGGTGC CGACCCTGGC ATGA
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Protein sequence | MAAQSGSRAG RNLPMAIGVG VGLGGIALLS LLTYRITFLI VIAAAVAVSV WELQGTLLRA RGLRISWIPV AAGSVATMAL AWPYGPAALG IGIAATTLLC MVWRFRLGAD GYLADLSASV FVTVYIGLFA GFATLMLVPA DGAQRILTFL ILVVANDVGG YAAGVLAGKH PMAPTISPKK SWEGFGGSLA ACMLAGALCV WLLLGGHWWV GLLLGVAIAV TATVGDLTES LIKRDLGVKD MGTLLPGHGG LMDRMDSLLP SAVVTWALLT VLVPTLA
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