Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3029 |
Symbol | |
ID | 8448642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 3321028 |
End bp | 3323475 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645042113 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003202355 |
Protein GI | 258653199 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00871852 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00628617 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGGTGT CCCGGCCGGA CCGGGGCGGT GCCGCCCGGG CGGACCCGGC CCGACCCCGG CACCTGCTGC TCGCCCTCGG CGCGTTCTGT GCGGTGTTGG TGCTGACCCA CACGGCCATG CTGGCCGCGG CCCAGTGGGA CGCCGCGACG ATCGTGCTGT GGGAGTCGAC CCTCGCGCTC TTCTTCGCCT CCGGCCTGAT CGCGCTGTGG CGTCAGCCGC ACAACCCGTT CGGTGCGCTG CTGCTGCTGG CCGGACTCGC GCAGTGGTGT GCGGGCCTGC AGACCGTGCC GGTGGCCGGG CTGGCCGCCA TCGGGTCGCT GACCAAGACG CTGCCGTTGG CGGTGACCGT CCACGTCATC CTGGCGTTCC CGACCGGCCG GGTGGCCCCC GGCCTGGCCC GGTTCACGGT GGTCCTGGCC TACGTCACCT CCACGGTGCT GGAAGTGCCG AGCATGGTGC TCGCCGGGAG CAGCTCGCTG CGCCTGGTTC AGACCGAACC GACCGCGGTG CTCGATGCCG CCGTCCTGGG CCAACGGCTG ACCGGGCTGA CCTGCCTGGG GCTGGCCATG AGCGTGCTGG CGATCCGGCT GGTCCGGATG AAACGCACCG GGCAGACCCA GCTGGGACCG TTCGTCCTGT ACGCGTTCGC CTGCCTGGTC GGGCTGACGG TGACCCTGAT CGCCCGGCTG ATCGGCCCGC TGGCCGGCAC CGGCCTGCTG GAGCGGACCG GCCCGGTCCA GGCGCTGCTG GTCGCCGCCC TGCCCGTGGT GTTCCTGTTC GGTGTGCTGA CCGGCTCGTT CGGCCGCACC GGGGAGCTGC GCGAATTCCT GGAGGGCATG AGCGACCGGA CGATGACGCC GGAGGAACTC GACGGTGCGG TGTCCCGGGC CATCGGGGTC CCGGGGAGCC GGGTCGTCTA CCGCGCCGAC GGGGTCGGGG ACGGCGGGTT CGGGGACGGC GAGGCCGAGT ACGTCGATGC CACCGGCACT CCGGTGCCGC CGGATCCGGC GCACGAGGCA CTGTTCCCGA TCCGACACGA CGGCGCCGCG GTCGGCGCCG TCGGCTACCG GCCGGGCGCC CAGGTCGATC CGCGGCTGCT GGAGGCGGTG GCCGATGCCT CGGCCCTGGT CATCAGCCAC CAGCGCACCC TGGCCAGCCT GCGGGCCGTG CTGCTGGACC TGCGCCGGAC CGAGCGGGCG CTGCGGCTGT CCCGGCGCCG GATCGCGGTG GCCGGTGACC CGGGAACGGC GCCGCATCGC CCGCGACCTG CACGACGGGG TGCAGCAGCA CGCGATCAAC CTCGGCCTGC TCGCCCAGCA GATCCAGCTC GCGCCGGACC CGGCCGGGAC GGCCGCCTCG GCCGCGGCCC TGCACACCGG GGTGATCACC CTGCTGGCCG AGGTGCGCAA CCTGATCGGG GGCATCATGC CGGCCCCGCT GGTCGAGCGG GGCATCGTCT CCGCGGTGCG GGCCCTGGCC GGCCGCAGCA CCGTGCCGGT CGACGTGCAG GTGCACGGCC CGCCGCGTCG GCTGCCCGCC GAGCTCGAGA GCACCGTCTA CTTCGTCGTC AGCGAGGCGA TCGCCAACAC CGGCAAGTAC GCGCAGGCAT CGACGATCCG GATCGTGCTC ACCATGACCG AGCAGGACGT GGTCGCCGAG ATCTCCGACG ACGGCATCGG CGGAGCCGTG CCCGGGTCGG GCACCGGACT GGTCGGGCTG CGCGACCGGG TGGCCGCGTT CGGCGGCACC CTGAGCGTGA CCTCGCCGCC GGGCGCCGGC ACGCAAGTGC GGATGATGAT CCCATGCGGA TAGCCCTGGC TGAGGACGAA GGTCTGTTCC GGCAGGGCCT GAGCAGCCTG CTCACCGCCG GCGGGCATCA GGTCGTGCTG TCCGCGGCGG ACGCCCAGCA GCTGGCCGAG CAGGTCCAAC AGACGGCCCC CGACCTGGTC ATCACCGACA TCCGGATGCC GCCGACCTAC ACCGGCGAGG GCTTCCAGGC GGCCAAGGAC ATCCGCCGGC GGATGCCGGA CGTGGCCATC GTGCTGCTGT CCCACCACGT CGACGCCCAG GGCACCATCG AGCTGCTGGC CGCCGGCCGG CACCGCATCG GCTACCTGCT CAAGCAGCGG GTGCTGGACT TCGGCATGTT CAACGGGGTG CTGGAACGGG TGCAGGCCGG CGAGTCCGTC ATCGACCCCG AGGTGGTCTC CGAGGCGCTC GCCGTCCGCC GACGGCGTCA CCCGGTCGAC AGCCTCACCC CGCGCCGGCT CGACGTGCTG AGCCTGATGG CTCAGGGCTA CAGCAACGCC CGGATCGCCC GCGAGCTGGT GGTCACCGAG GCGGCGGTGG CCCGCAACAT CGGGCTGATC TTCGACACCC TCGACCTGCC GCCCGACCCG AACATCCATC GCCGGGTGCA GGCCGTCCTG GAGTACCTCA ACCAGTAG
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Protein sequence | MSVSRPDRGG AARADPARPR HLLLALGAFC AVLVLTHTAM LAAAQWDAAT IVLWESTLAL FFASGLIALW RQPHNPFGAL LLLAGLAQWC AGLQTVPVAG LAAIGSLTKT LPLAVTVHVI LAFPTGRVAP GLARFTVVLA YVTSTVLEVP SMVLAGSSSL RLVQTEPTAV LDAAVLGQRL TGLTCLGLAM SVLAIRLVRM KRTGQTQLGP FVLYAFACLV GLTVTLIARL IGPLAGTGLL ERTGPVQALL VAALPVVFLF GVLTGSFGRT GELREFLEGM SDRTMTPEEL DGAVSRAIGV PGSRVVYRAD GVGDGGFGDG EAEYVDATGT PVPPDPAHEA LFPIRHDGAA VGAVGYRPGA QVDPRLLEAV ADASALVISH QRTLASLRAV LLDLRRTERA LRLSRRRIAV AGDPGTAPHR PRPARRGAAA RDQPRPARPA DPARAGPGRD GRLGRGPAHR GDHPAGRGAQ PDRGHHAGPA GRAGHRLRGA GPGRPQHRAG RRAGARPAAS AARRAREHRL LRRQRGDRQH RQVRAGIDDP DRAHHDRAGR GRRDLRRRHR RSRARVGHRT GRAARPGGRV RRHPERDLAA GRRHASADDD PMRIALAEDE GLFRQGLSSL LTAGGHQVVL SAADAQQLAE QVQQTAPDLV ITDIRMPPTY TGEGFQAAKD IRRRMPDVAI VLLSHHVDAQ GTIELLAAGR HRIGYLLKQR VLDFGMFNGV LERVQAGESV IDPEVVSEAL AVRRRRHPVD SLTPRRLDVL SLMAQGYSNA RIARELVVTE AAVARNIGLI FDTLDLPPDP NIHRRVQAVL EYLNQ
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