Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3012 |
Symbol | |
ID | 8448625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3301125 |
End bp | 3302489 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 645042096 |
Product | hypothetical protein |
Protein accession | YP_003202338 |
Protein GI | 258653182 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000534501 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000212154 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGACCGCGG TCGCCGACGG TTCCTGGGTG GGGCGGCGCT ACGGCATCGA GGTCGCCGAT CGGTGCTCGC CGGTCGGCCT GGCCATGGTC GATCTGACCC GGATCGCCCT GCGTCGCAAC CCCAAGCGGG CCCAGCTGCT GGTCTCGACC GTGCTGGGCA AGCACCTGCC GGTGGATCCA CGGGTGGTCG ACGGGGCCGG CCGGCTGCTG GGGGCGCTGG TCGCCCGCGC CCTGGCCGAC GACGGGTCGC CGGTGCCGGC CGACTGGCGC GACGCCGCAC GGGCGAGTGT GCGTGGCGGC GACCCCGACC GGTTGATGGC CCTGGTGGCC GCCGAACGCC GGGCCCCGGC GCCGGACGTG CTCACGGTGG GCTTCGCCGA GACCGCGACC AGCCTGGGGC ACCTGGTCGC CGACCAGCTC GGCTCGGGTT ACCTGCATTC GACCCGCCGG CCGGACGGTC CGGTGCCGGT GGCCGCCGAC TTCGTCGAGT CGCACTCGCA CGCGACCGAC CACCTGCTGC GGCCGGGGCC GGCGGTGTCG CTGGCCGGCG CCGGCCCGGT GGTGCTGGTC GACGACGAGC TGTCCACCGG GCGAACCGCG CTCAACGTCA TCGAGTCGCT GCACGCCACG CACCCGCGCG ACCGTTATGT GCTGGCCGGT CTGGTGGACG CCCGGAGTCC CGAATCCGAC GCGGTGCGCC GGTCGGTGGC CGCCCGGCTC GGCTGCCGGA TCGACGTCGT CGCGTTGGTC GGCGGGGCCG TTGGGGTGCC CGACGGCACC GTCGATCGGG TCGCGGCCGA CCTCGCCGGC CTCGACCCGG CGGCTCCGGC CGGGTCGGGC GACGTGCGCA CGGTGCAATT GCCCTGGCCG TCGGAGGTGC CGCAGGGTGG CCGGCACGGG TTCGCCGACG CCGACCGGCC CGCGTTCGAC GCGGCGATCC TGGCTGCGGC CGGCCCGCTC GCGGTCGCCT GCGGGGATGC CCGCCGGGTG CTGGTGGTCG GCACCGAGGA GCTGATGTAC CTGCCGCTGC GGCTGGCCCT CGCGCTGCGC GGGCCCGGGC GGGCCACCGC GTTCCAGTCG ACCACCCGGT CCCCGGTGCA CGCGATCGAC GAGCCCGGTT ACCCGATCCG GCGGCGGATC GATTTCCGGG CGCGGGTGCA TCCGGCGACC GACGAACTGG CCGTCCGGCA CGTGTACAAC GTGCGCTGGC CGGACCCGAT CGACTCCGTG GGTCCGGAGG AGGCCGACCT GGTGGTCGTG GTCGACGACG GGCACGCCGT CGACGGCCCG GACGGGGTCG CCCAGGCGGT GGCCGCGGCG ACCGGCGCCC CGGTCGTGCT GGCTCGATTG GCCGTGGCCC GATGA
|
Protein sequence | MTAVADGSWV GRRYGIEVAD RCSPVGLAMV DLTRIALRRN PKRAQLLVST VLGKHLPVDP RVVDGAGRLL GALVARALAD DGSPVPADWR DAARASVRGG DPDRLMALVA AERRAPAPDV LTVGFAETAT SLGHLVADQL GSGYLHSTRR PDGPVPVAAD FVESHSHATD HLLRPGPAVS LAGAGPVVLV DDELSTGRTA LNVIESLHAT HPRDRYVLAG LVDARSPESD AVRRSVAARL GCRIDVVALV GGAVGVPDGT VDRVAADLAG LDPAAPAGSG DVRTVQLPWP SEVPQGGRHG FADADRPAFD AAILAAAGPL AVACGDARRV LVVGTEELMY LPLRLALALR GPGRATAFQS TTRSPVHAID EPGYPIRRRI DFRARVHPAT DELAVRHVYN VRWPDPIDSV GPEEADLVVV VDDGHAVDGP DGVAQAVAAA TGAPVVLARL AVAR
|
| |