Gene Namu_2481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2481 
Symbol 
ID8448092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2738245 
End bp2738727 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content73% 
IMG OID645041594 
Productphenylacetic acid degradation protein PaaD 
Protein accessionYP_003201838 
Protein GI258652682 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000323431 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00762361 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACCAGGC CGGACTTTCC GCCGATCGAG TCGGCCGCCG GCCCGGATGA GCTGGCCGGG 
CGGTGCGCCG CCGCGATGTG GGCGCAGGAC CGGGCCAGCC AGCAGCTGGG TATGAGCCCC
CCGGTCGTCG GCCCCGGACG GGCCAGCCTG ACGATGCGCG TACGCGAGGA CATGGTCAAC
GGTCAGGGCA ATTGCCACGG CGGGGTGCTG GCCACGCTCG CCGACAGCGC GTTCGCGTTC
GCCTGCAACA CCTACGACGA GGTGACGGTG GCCGCGGGCT TCGACATCGT CTTCGTCGCC
CCCGCCCGGC TGGGCGATCA ACTGACCGCG ACCGCCCTCG AGCGGGCCCG TTTCGGCCGC
AGCGGCCTGT ACGACGTGTC CATCACCCGT GCCGACGGCG AGCTCGTGGC CGAGTTCCGC
GGTCGGAGCC GCTCCCTGGG TCGGCCCCTA CTCGGGCCGG GTGAGCCTTC GGCCGGGGCG
TGA
 
Protein sequence
MTRPDFPPIE SAAGPDELAG RCAAAMWAQD RASQQLGMSP PVVGPGRASL TMRVREDMVN 
GQGNCHGGVL ATLADSAFAF ACNTYDEVTV AAGFDIVFVA PARLGDQLTA TALERARFGR
SGLYDVSITR ADGELVAEFR GRSRSLGRPL LGPGEPSAGA