| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2402 |
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| Symbol | |
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| ID | 8448013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2649378 |
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| End bp | 2651654 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645041521 |
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| Product | trehalose synthase |
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| Protein accession | YP_003201765 |
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| Protein GI | 258652609 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02455] trehalose synthase, Pseudomonas stutzeri type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000104329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000210586 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCGATT CGGGACAGGA TGCCGCCGCA CTCGCGGACC CCCAGATCCA GGACTCCACC
GAATCGGACG AGTCGCCCAC CGCCACCGAG ATCTCCTTCG ATGAACATTT CTATCCGGCC
CGACCGCGGG CGCTGGGCCC GCGGGCGCGG CTGAATCACC TGAGCGAGGC GCCGCCGCCG
TTCGCGGCCG ACGCGCGCAA CCACGCCTAC GTCGAGTGGC TCGAGAACAT GTCGATGCTG
GGCGACGCGA ACAACGTGGC CCGCCAGCTG TCCGGCCAGG CGGGCATGTG GCTCAACCCG
TACGCGTACC CGAACCCACG GTCGGCCGTC GACCGGGCCT CGGTCTGGTT CACCGCCTAC
CCGCTGTCGC TGATCTCGGC GCCCGGCCAG TCCTACCTGG CCGCCCTCGG CGAGGAGGGA
CTGTGGACGG CGTTCGAGCA GATCGGCGTC GAGGCCGTGC ACATCGGTCC GGTCAAGCGG
GCCGGCGGCA TCAGCGGGTG GGACTACACC GCCAGCGTGG ACGGCCATTT CGACCGGATC
AGCATGGCCC TGGACCCGTT GTTCGGGACC GAGAAGGATT TCCGGGTGAT GTGCGCCGAG
GCCCTGGCCC ATGACGGGGT GATCATCGAC GACATCGTGC CCGGCCACAC CGGCAAGGGG
GCCGACTTCC GGCTGGCCGA GATGAACCAC AAGGACTACC CGGGGATCTA CCACATGGTC
GACATCCCCG AGGAGGACTG GCATCTGCTG CCCGACGTGC CGCCCGGTCA GGACTCGGTC
AACATCGACC AGGCCACCGA GAAGGCGTTG CAGGAAACCG GGTACATCAT CGGCCAGATG
CAGCGGGTGA TCTTCTACGA GCCGGGGGTC AAGGAGACCA ACTGGAGCGC GACCCGGGCC
GTCCGGGACA CCACCGGCAA GTTCCGGCGG TGGGTGTACC TGCACTATTT CAAGTCCGGC
CAACCGTCGA TCAACTGGCT GGACCCGACC TGCTCGGGCA TGCGGCTCGT GCTGGGCGAT
GCCATGCACT CGCTGGTCGA CCTGGGCTCG GCCGGACTCC GCCTGGACGC CAACGGCTTC
CTGGGCGTGG AGAAGAGCGC CGAGGAGCAG CCGGCCTGGT CCGAGGGGCA CCCGCTCTCG
CAGGCGGCGA ACCAGCTCAT CGGCAGCATG GTCCGCAAGG TCGGCGGGTT CACCTTCCAG
GAACTGAACC TGACGATGGA CGACATCAAG GCCACCTCCA AGGACGGCCC CGACCTGTCC
TACGACTTCG TCACCCGGCC GGCGTACCAC CACGCCTTCG TCACCGGCGA CACCGGATTC
CTGCGGCTGA CCCTGCGGGA GGCCATGAAG ATCGGCATCG ATCAGGCCTC GCTGGTCCAC
GCCCTGCAGA ATCACGACGA GATGACCTAC GAGCTGGTTC ATTTCGCCAC CAAGCACAAG
GACGAGACCT ACACCCTGGG CGGTCGCGAG TTCCTGGGCT CCGATCTGGC CGAGCACATC
CGGCAGACGC TGCGGGACAA GATCACCGAA CCGGCGGCGT CCTACAACCT GGTGTTCACC
CAGAACGGCA TCGCCTGCAC CACCGCGTCG ATCATCGCCG CCACCCAGGG TCTGGCCGAC
CCGGCCGCGG CCACCGACGA GCAGGTCGAG CAGATCCGGC GCGGCCACCT GCTGCTGGCC
ATGTTCAACG CGCTGCAGCC CGGGGTCTTC GCCCTCTCCG GCTGGGACCT GGCCGGCAAC
GTCACGCTCG ACCCGGCGCA GGTGCAGAGC CTGATCCGGG AGGGTGACAC CCGCTGGATC
CACCGCGGCG CGCACGATCT GATGGGGGCC AACCCCGCGG CCACGGCGTC CACCTCGGGC
ATGCCCAAGG CCCGCAGCCT CTATGGCAGC CTGCCCGACC AGCTCGCCGA CCCGGCGTCC
TTCGCCCGGC AGCTGGGCCG GGTCCTGGCG GTGCGCAAGC AGCTGGGCAT CGCCACCGGG
GCCCTGCTGG AGGTCATCGA GGCCGCCGAT CCGGAGGTGT TGGCGATGGT CAACTGGACG
GCCAGCGGCC TGATCCAGTT GACCGTCTTG AACTTCTCCG GCACCGATCT GGTGGCCGAG
ATCGCCTCCG ACCACCTGGA ACCGGGCTGC GCCGTGGTCG ACGGCCTGGA CGAGAGCTAC
CGGGCCGTGG TCGACGCCGA CCGGCACCTG TCCGTCCCGC TGGCCGCGTA CCAGGGCCGG
GCCCTGGTGG TCGAGCCGGC CGCGGCCCCG AGCGAGTCCG CGCCCGTCAG CGGGTAG
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| Protein sequence | MTDSGQDAAA LADPQIQDST ESDESPTATE ISFDEHFYPA RPRALGPRAR LNHLSEAPPP
FAADARNHAY VEWLENMSML GDANNVARQL SGQAGMWLNP YAYPNPRSAV DRASVWFTAY
PLSLISAPGQ SYLAALGEEG LWTAFEQIGV EAVHIGPVKR AGGISGWDYT ASVDGHFDRI
SMALDPLFGT EKDFRVMCAE ALAHDGVIID DIVPGHTGKG ADFRLAEMNH KDYPGIYHMV
DIPEEDWHLL PDVPPGQDSV NIDQATEKAL QETGYIIGQM QRVIFYEPGV KETNWSATRA
VRDTTGKFRR WVYLHYFKSG QPSINWLDPT CSGMRLVLGD AMHSLVDLGS AGLRLDANGF
LGVEKSAEEQ PAWSEGHPLS QAANQLIGSM VRKVGGFTFQ ELNLTMDDIK ATSKDGPDLS
YDFVTRPAYH HAFVTGDTGF LRLTLREAMK IGIDQASLVH ALQNHDEMTY ELVHFATKHK
DETYTLGGRE FLGSDLAEHI RQTLRDKITE PAASYNLVFT QNGIACTTAS IIAATQGLAD
PAAATDEQVE QIRRGHLLLA MFNALQPGVF ALSGWDLAGN VTLDPAQVQS LIREGDTRWI
HRGAHDLMGA NPAATASTSG MPKARSLYGS LPDQLADPAS FARQLGRVLA VRKQLGIATG
ALLEVIEAAD PEVLAMVNWT ASGLIQLTVL NFSGTDLVAE IASDHLEPGC AVVDGLDESY
RAVVDADRHL SVPLAAYQGR ALVVEPAAAP SESAPVSG
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