| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2144 |
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| Symbol | |
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| ID | 8447755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2365224 |
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| End bp | 2368544 |
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| Gene Length | 3321 bp |
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| Protein Length | 1106 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 645041267 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003201511 |
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| Protein GI | 258652355 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG2887] RecB family exonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.101146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00462342 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAGCG CGATCGACCT GGCTCGCGAG CTCGGCCTGC CCGCGCCGAC GGCCGAACAG
GCCGCGGTGA TCGAGGCGCC GCTGGAGCCG GGGCTGGTGG TCGCCGGCGC CGGGTCGGGC
AAGACCGAGA CGATGGCCGC CCGGGTGGTC TACCTGATCG CGACCGGACA GGTGCGCCCC
GAGCAGGTGC TGGGACTCAC CTTCACCCGC AAGGCCGCGG CCGCACTGGC CCAACGCATC
CGCCAGCGAC TGGCCCTGCT CACCACCCTG CGCCCGCGGA CCGGGAGCGG CCGGTCACCG
GCCGATCTGC CCGCCGGCGA CCCGGACGTC AGCACCTACC ACGCCTTCGG CGGGCGGCTG
ATCGCCGACT TCGGGCCGTT GGCCGGCATC GAACCGGCAG CCCGGGTCCT GACGCCGACC
GGCGCCTGGC AGTTGGCCCG GCGGGTGGTG GGGCGCTGGG ACGGTGACCT GCTCACCGAC
CTGGGTCCCG ATCAGGTCAC CGAGCGGCTG CTGGCGATCT CCTCCGCGCT GGCCGATCAC
CTGACCGACG TCGACCTGCT CTCCGACGAG TTGGCCACCG TGCTGGACCG GTTGCGCTCG
GCGCCTCCGG GTCCCCGGCA GCGGGCCGCC CTGCACAGCG GGTTGGCCGG GCCGGTGAAG
CGGCTGCAGG ATCGCCAGTG GATCCTGCCG TTGGTCGCGG CCTACGTCCG GGCCAAGCGT
GACCGCGGGG TGGTCGACTT CGCCGACCAG ATGCAGATCG CCGCCACCCT GGTCCGGGAG
CACCCACGCA TCGGCGAGGC GATGCGTGAG CGCTACCGGG TGGTGCTGCT GGACGAGTAC
CAGGACACCG GCCACGCGCA GCGCGTCATC CTGCGGTCGC TGTTCGGCGA CCGGGACGGC
GCGGGCCGGG CCGGCGGTCA TGGTCAGGCG CGGTGGGGTC ACCCGGTGAC CGCGGTCGGC
GACCCGGTGC AGTCGATCTA CTCCTGGCGC GGCGCGTCGG CCTCCAACTT GCCGCGGTTC
GTCACCGACT TCCCGCTCGC TTCGGGCCGC CCGTCGAGCA TCCGCTCGCT GCTGACCAGC
TTCCGCAACC CGGGTGCGGT GCTGGCCCTG GCCAATGAGG TGTCGCGGCC GGTCCGGCAG
GGGGGTCGGG CGGTCGAGGT CGGCGAGTTG CGGCCGACCC CGGCCGCGGA CCCGGGACGG
CTGCGGTACG GCCTGTTCGG CACCGCGGAG CAGGAGAACG CCTGGCTGGC CGAGGCGATC
GCCGGCTACT GGCGTGACGC GCTGGACGAG GGCGGGGCCG GGGCGACGCC GCCGACCACC
GCCGTGCTGG TGCGGCGGCG CAGCGACATG GCCGACACCG CCGACGCCCT GCGCGCCGCC
GGTCTGCCGG TCGAGGTGGT CGGTCTGGGT GGCCTGCTCG ACGAGCCCGA GGTGGCCGAC
CTGGTGGCGA CATTGCGGGT GCTGGTCGAT CCGACCGCCG GCCCGGCGGC GATGCGGCTG
TTGACCGGCG CGCGCTGGCA GTTGGGGGCG GCCGACCTGG AGGCGCTGGC CGCGCGGGCC
CGGGAACTGG CCGGCCCCGC CCGGCCTGCC GACGGGCACG GTGCCGGCGG ACCGGCGGAT
CCCACCGCGG TGGTGCGTTC GGCAGTGGCC GCGGCCTTGC CGGTCGAGGA CATCGACACC
TGGTCGATGG TCGACGCCGC CGGCGACCTG GGACCGGCCC AGGCCTACTC GGCCGCCGGC
CATCGCCGGC TGGTCCGGTT CGCCGCGCAC CTGGCCCGGT TGCGCGCCCG GCTGAACCAG
CCCCTGCCGG ACCTGATCGC TGACCTGGAA CGGGCGTGCC ACCTGGACGT GGAGTCGCTC
GTCGCCGGCA CGGGTCGGGC CCATCTGGAC GCGTTCGCGG CCGTGGTCGC CGAGGTTGCG
GCCACCGGAG CCGGGCCGGC CGAGTTGCTG GAGTATCTGG ATGCGGCCGC CGAGCGGGAG
GACGGCCTGA CGCCGGGCGA GGTACCTCAG CCCTCCGGCC GGGTCCAGGT GCTGACCGTG
CATGCGGCCA AGGGGCTGGA GTGGGAGATC GTCGCGGTCC CGCACCTGAC CGAAGGGGTC
TTTCCGATCA CCCGGGGCAG CACCTGGCTG GGCGATCCGG CGCAGCTGCC GCCGCAGCTC
CGCGGAGACC GGGACGATCT GCCGCAGCTG GCCTGGCCGG CCGGCGGCAC CCAGAAGGAT
CTGGCCGATG CCCTGGCCGC CCATGCCGCC GAGTTCGGTG AGCTCAGGCT GACCGAGGAG
CGGCGGCTGC TCTACGTCGC GCTCACCCGG GCCGAACGAA CGCTGCTCTT CTCCGGGCAT
CACTGGGGCA CGGGCCTGGC CAAACCGGCC GGACCCAGCC CGTTCCTCGA AGAATGCGCC
GCGTTGGCCC GGCCGTTCGC CGAGCCGGAC GAGTGGGCGC CGCCTCCGGC CACCGACGAG
GGCCAGCAGT TGCTGCCGCG GACCGCGGTG TGGCCCATCG ACCCGCTCGG CCCGCGGCGG
CCGCACGTTC AGGTCGGGGC CGATCGGGTG CTGCAGGCGC TGGCCGACCT GGCCGCAGCG
GAGCCGGAGC CCGTCGAGGA CCGGCCGGGC ACTGCGGATG AGGTGGACAC TGGTGATCCG
TTCGGCTGGG CGGCGGACGT GACGACGCTG CTGGCCGAAC GATCCGACCG GGGGCGAGAA
GTGCACGAGG TGGAACTGCC GGGGACGATC ACCGTGACCT CGCTGGTGGA GCTGGCCGAC
GACCCGGCCG AACTGGCTCG GCGGTTGACC CGCCCGGTCC CCACCGAGTC CTCCGGTCGG
CTCAGCCGCG GCACCGACTT CCACGCCTGG CTCGAGCACC GGTTCCGCGG CGAGGCGCTG
TTGGAGCTGT CCGACCTGCC GGGCGCGGGT GACGCCTGGG TCGGCGCGGA CCCGGAGATC
GAGGATCTCA AGCGCCGGTT CCTGGCCTCG CCGTGGGCCG ACCGGGTGCC GATCGACGTC
GAGGTGCCGT TCGCCAGCCG GATCGCCGGG TTGGGGGTGC GGGGACGGGT GGACGCGATC
TTCGCCGACG CCGACGGCGG GATCACCGTG GTCGATTGGA AGACCGGCCA TTCGCCGCTG
CGCGAGGACG CGGCCGCCGT GCAGCTGGCC TGCTACCGGC TGGCCATCGC CCAGCTGCAC
GGGTTGCCGC TGGCCCGGGT CAGGGCCGCT TTCCACTACG TGCGCTCCGG GGTGACCCAG
TCCCCGGCGA ACCTGCTCGA CGCGGACGGT ATCGAGGCGC TCATCGCCCG CAACACCCTT
GACCCGGTGC CGCCGCGATG A
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| Protein sequence | MISAIDLARE LGLPAPTAEQ AAVIEAPLEP GLVVAGAGSG KTETMAARVV YLIATGQVRP
EQVLGLTFTR KAAAALAQRI RQRLALLTTL RPRTGSGRSP ADLPAGDPDV STYHAFGGRL
IADFGPLAGI EPAARVLTPT GAWQLARRVV GRWDGDLLTD LGPDQVTERL LAISSALADH
LTDVDLLSDE LATVLDRLRS APPGPRQRAA LHSGLAGPVK RLQDRQWILP LVAAYVRAKR
DRGVVDFADQ MQIAATLVRE HPRIGEAMRE RYRVVLLDEY QDTGHAQRVI LRSLFGDRDG
AGRAGGHGQA RWGHPVTAVG DPVQSIYSWR GASASNLPRF VTDFPLASGR PSSIRSLLTS
FRNPGAVLAL ANEVSRPVRQ GGRAVEVGEL RPTPAADPGR LRYGLFGTAE QENAWLAEAI
AGYWRDALDE GGAGATPPTT AVLVRRRSDM ADTADALRAA GLPVEVVGLG GLLDEPEVAD
LVATLRVLVD PTAGPAAMRL LTGARWQLGA ADLEALAARA RELAGPARPA DGHGAGGPAD
PTAVVRSAVA AALPVEDIDT WSMVDAAGDL GPAQAYSAAG HRRLVRFAAH LARLRARLNQ
PLPDLIADLE RACHLDVESL VAGTGRAHLD AFAAVVAEVA ATGAGPAELL EYLDAAAERE
DGLTPGEVPQ PSGRVQVLTV HAAKGLEWEI VAVPHLTEGV FPITRGSTWL GDPAQLPPQL
RGDRDDLPQL AWPAGGTQKD LADALAAHAA EFGELRLTEE RRLLYVALTR AERTLLFSGH
HWGTGLAKPA GPSPFLEECA ALARPFAEPD EWAPPPATDE GQQLLPRTAV WPIDPLGPRR
PHVQVGADRV LQALADLAAA EPEPVEDRPG TADEVDTGDP FGWAADVTTL LAERSDRGRE
VHEVELPGTI TVTSLVELAD DPAELARRLT RPVPTESSGR LSRGTDFHAW LEHRFRGEAL
LELSDLPGAG DAWVGADPEI EDLKRRFLAS PWADRVPIDV EVPFASRIAG LGVRGRVDAI
FADADGGITV VDWKTGHSPL REDAAAVQLA CYRLAIAQLH GLPLARVRAA FHYVRSGVTQ
SPANLLDADG IEALIARNTL DPVPPR
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