Gene Namu_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2126 
Symbol 
ID8447737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2343776 
End bp2345194 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content68% 
IMG OID645041249 
ProductATP synthase F1, beta subunit 
Protein accessionYP_003201493 
Protein GI258652337 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000010229 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00725427 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACAA CTGAGGCGCG CGCCACCACC GGACGCGTCG TGCGGGTGAT CGGGCCCGTC 
GTCGACGTCG AGTTCCCGCG CGGCCAGGTG CCCGATCTGC TCAACGCCCT GCACGTGCGG
GTGACCGAGG GCGGGCCGGC GCGCACGCTG ACCCTCGAGG TCGCCCTGCA CCTGGGCGAC
GACATCGTCC GCTGCATCTC GATGCAGCCC ACCGACGGCC TGGTCCGCAG CGCGTCGGTC
ACCGACACCG GGGCCCCGAT CTCGGTGCCG GTCGGCGACG CGGTCAAGGG TCACGTGTTC
AACGCGCTCG GCCGATGCCT GGACGCGCCG GGCACCGGTG AGGACGCCGA GCACTGGCCG
ATCTACCGCA AGCCCCCGGC ATTCGATCAG CTCGAGGGCC GCACCCAGCA GCTGGTGACC
GGCATCAAGG TCATCGACCT GCTGACCCCG TACGTGCAGG GCGGCAAGAT CGGCCTGTTC
GGTGGCGCCG GCGTGGGCAA GACCGTGCTC ATCCAGGAGA TGATCACTCG GGTGGCCAAG
AACTTCGGTG GCACCTCGGT GTTCGCCGGC GTGGGGGAGC GGACCCGCGA GGGCAACGAC
CTCTTCACCG AAATGACCGA GTCCGGCGTC ATCAACGACA CCGCGCTGGT CTTCGGCCAG
ATGGACGAGC CCCCGGGCAC CCGGATGCGG GTCGCACTGT CCGCGCTGAC CATGGCCGAG
TACTTCCGCG ATGTGCAGAA CCAGGACGTG CTGCTGTTCA TCGACAACAT CTTCCGGTTC
ACCCAGGCCG GCTCCGAGGT GTCCACGCTG CTGGGCCGGA TGCCGTCCGC GGTGGGTTAC
CAGCCCACCC TGGCCGATGA GATGGGCGAG CTGCAGGAGC GGATCACCTC GACCAAGGGC
CGGTCGATCA CCTCGCTGCA GGCCATTTAC GTGCCGGCCG ACGACTACAC CGACCCGGCG
CCGGCGACCA CCTTCGCGCA CCTGGACGCC ACCACCGAGC TCGACCGGGC GATCACCGAG
AAGGGCATCT ACCCCGCGGT GAACCCGCTG TCCTCGACCT CGCGGATCCT GGACCCGCAG
TTCGTCGGCG ACGAGCACTA CCGGGTCGCG CAGGAGGTCA TCCGGATCCT GCAGAAGTAC
AAGGAACTGC AGGACATCAT CGCCATCCTG GGCATGGACG AGCTGGGCGA AGAGGACAAG
CTCCTCGTCG GCCGCGCTCG CCGGATGGAG CGGTACCTGG GCCAGAACTT CTTCGTGGCC
AAGCAGTTCA CCGGCATGGA GGGCTCCTAC GTGGAGATGG AGGAGACCAT CGCCTCCTTC
GACGCCATCG CCAAGGGCGA GTACGACAAC ATCCCCGAGC AGGCGTTCCT CAACGTCGGC
GGCATGGACG ACGTGCTGGC CAAGGCCAAG ACCCTGTAG
 
Protein sequence
MTTTEARATT GRVVRVIGPV VDVEFPRGQV PDLLNALHVR VTEGGPARTL TLEVALHLGD 
DIVRCISMQP TDGLVRSASV TDTGAPISVP VGDAVKGHVF NALGRCLDAP GTGEDAEHWP
IYRKPPAFDQ LEGRTQQLVT GIKVIDLLTP YVQGGKIGLF GGAGVGKTVL IQEMITRVAK
NFGGTSVFAG VGERTREGND LFTEMTESGV INDTALVFGQ MDEPPGTRMR VALSALTMAE
YFRDVQNQDV LLFIDNIFRF TQAGSEVSTL LGRMPSAVGY QPTLADEMGE LQERITSTKG
RSITSLQAIY VPADDYTDPA PATTFAHLDA TTELDRAITE KGIYPAVNPL SSTSRILDPQ
FVGDEHYRVA QEVIRILQKY KELQDIIAIL GMDELGEEDK LLVGRARRME RYLGQNFFVA
KQFTGMEGSY VEMEETIASF DAIAKGEYDN IPEQAFLNVG GMDDVLAKAK TL