Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2048 |
Symbol | |
ID | 8447657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 2258367 |
End bp | 2259182 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645041172 |
Product | general secretion pathway protein-related protein |
Protein accession | YP_003201418 |
Protein GI | 258652262 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00486349 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00515414 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCGTGC AACGCCTTCA GGCCCACTAC GGCTTCACCC GGATGCCGTT CGGCCGGAAC CTGGCCCCGG GCATGCTGCA TCGGCACCGC GGACTGGGCG AAGCGATCGC CCGGATCAGC TGGTGCGTCG ACCAACACGC CCTCGGCGTG ATCACCGGCG AGGTCGGCGC CGGCAAGACC GTCGCCGTCC GCGCCGCCAC CGCCGCCCTG GACAGCAGCC GGCACGTCGT CATCTACCTG CCCAACCCGT CCGTCGGGGT CCGCGGCATG CTCCACCACA TCGTCGCCGC CCTGGGCCGG ACCCCGTCGT TCTACACCTC GATCCTGGCC CCGCAAGCCG CCGACGCCCT CGCGGCCGAA CACGCCGAAC GCGGCCGCAC CCCCGTGGTC GTGATCGATG AGGCGCACCT GTTGGACAAC CAGCAACTCG AAGCACTGCG CATGCTGTCC AACCACGACA TGGACTCCGG CAGCCCGTTC GCCGCGCTGC TCGTCGGGCA ACCCACCCTG CGGCACCGGC TGCGCCTCGG CGTGCTCGCC GCGCTGGACC AACGGATCTC GGTGCGCTGC ACCCTGACCG GGATGACCGA CCAGGAAACC GCGGACTACC TCACCCACCA CCTCAAGATC GCCGGCCGCA GCGACACCCT GTTCAGCGGC GACGCCACCA CCCTGATCCA CAACGCCGCC CGCGGCTACC CCCGCGCCAT CAACAACCTC GCGATCAACG CCCTGACCGC GGCGTTCGCC CGCAACCAGG CCATCGTCGA CGAGAAATCA GCCCGGGCCG CGATCGCCGA AACAGGAGGC GAATGA
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Protein sequence | MSVQRLQAHY GFTRMPFGRN LAPGMLHRHR GLGEAIARIS WCVDQHALGV ITGEVGAGKT VAVRAATAAL DSSRHVVIYL PNPSVGVRGM LHHIVAALGR TPSFYTSILA PQAADALAAE HAERGRTPVV VIDEAHLLDN QQLEALRMLS NHDMDSGSPF AALLVGQPTL RHRLRLGVLA ALDQRISVRC TLTGMTDQET ADYLTHHLKI AGRSDTLFSG DATTLIHNAA RGYPRAINNL AINALTAAFA RNQAIVDEKS ARAAIAETGG E
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