Gene Namu_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2012 
Symbol 
ID8447621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2221935 
End bp2222897 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content69% 
IMG OID645041139 
ProductPfkB domain protein 
Protein accessionYP_003201385 
Protein GI258652229 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID[TIGR02152] ribokinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0768209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000616715 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATCGTCG TGGTCGGCTC GCTCAACGCC GACCTGGTCG TGACCACCGA GCGCCACCCG 
CAACCGGGGG AGACGGTCCG GGGCGGCAAC CTTTCCGTCA TCCCCGGGGG TAAGAGCGCC
AACCAGGCCG TCGCGGCCAG CCGGCTCGGC GGACGGGTGA GGTTGATCGG CGCGGTCGGT
GATGACGCCA ACGGCGACCT GCTGCGTACG GCTGCCGCCG CGGCCGGCGT CGATGTCGCC
GGCGTGCAGG TCCGTCCCGG GACGGTCACC GGAACCGCCG TCATCACCGT CGATGCCGCG
GGTGAGAACA CCATCGTCAT CTCGCCAGGA GCCAACGCAT TGGTCAACGC CGACCAGATT
GGCGCCCGGA CATTCGACGG GGCCGCAGCC CTGGTCCTGT GCCTGGAGAT CCCGATCGAT
GTCGTCCTGA CCGCAGCCCG CACTGCCGCC GCGGCGGGAG TCACGGTCGT CACCAATCTC
TCGCCCTACC AACGGGTGCC GCGGGAACTG CTGACCCTGA CCGATGTGCT GCTGCTCAAC
GACCACGAAG CGCAGCACCT GGTCGGCGCG ACCGGTGCCA CCTCGACTTC CGAGCTGCGC
GACGCGCTGG CCGCACACCA CATTCAGCGC GCCATCGTCA CCCGCGGCGT TGATGGCTGC
CTTGTCTTCG ACGGTCCCGC CCCTGTCGTC CACGTCCCCA CCGTGCAAGT GACGGCCGTC
GACACCACCG GATGCGGCGA CGCCTTCACC GGAGCCCTGG CCTTTCGCCT GGCTTGCGGG
GACACCGTCG TCGCCGCCGC TCAATTCGCG ACCAAGGTCG GCGCCTACGC AGCCACCAAA
CCAGGGGCGC AAAGCTCGTT CCCCACTGCT GCCGAACTGT GTCAGTTCCT GTCCGGCCGC
GAGCCGGCGA GGCAGAACTC GATCCCTCCG GGAACGACGG TCGGTCATGG ATCAGGGCAA
TGA
 
Protein sequence
MIVVVGSLNA DLVVTTERHP QPGETVRGGN LSVIPGGKSA NQAVAASRLG GRVRLIGAVG 
DDANGDLLRT AAAAAGVDVA GVQVRPGTVT GTAVITVDAA GENTIVISPG ANALVNADQI
GARTFDGAAA LVLCLEIPID VVLTAARTAA AAGVTVVTNL SPYQRVPREL LTLTDVLLLN
DHEAQHLVGA TGATSTSELR DALAAHHIQR AIVTRGVDGC LVFDGPAPVV HVPTVQVTAV
DTTGCGDAFT GALAFRLACG DTVVAAAQFA TKVGAYAATK PGAQSSFPTA AELCQFLSGR
EPARQNSIPP GTTVGHGSGQ