| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1919 |
|---|
| Symbol | |
|---|
| ID | 8447526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 2112859 |
|---|
| End bp | 2113821 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645041049 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_003201297 |
|---|
| Protein GI | 258652141 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0160088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000217018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTTG CTCCGGAAGG CCGCAAGCTC CTCCGGCTGG AGGTTCGTAA CGCGGCCACA
CCGATCGAGA AGAAGCCGGA GTGGATCAAA ACCCGGCTGC GCACCGGACC CGAGTTCCAG
CAGCTGCAGA GCCTGGTCAA GCGCGAGGGT CTGCACACGG TGTGCCAGGA GGCCGGTTGT
CCCAACATCT ACGAGTGTTG GGAAGACCGC GAGGCCACCT TCCTGATCGG TGGCGACCAG
TGCACCCGTC GCTGCGACTT TTGCCTGATC GACACCGGCA AGCCCGGTGA ACTCGATCGG
GACGAGCCGC GGCGGGTCGC CGAGTCGATC CGGAGCATGG ATCTGCGGTA CGCGACCATC
ACCGGGGTCA CCCGCGACGA CCTGCCCGAC GAGGGCGCCT GGTTGTACGC GGAGACCATT
CGCCAGGTGC ACGCCCAGGC TCCGCAGACC GGGGTGGAGA TTCTCACCCC GGACTTCTCC
GGCCACCCCG AGCTGCTCAA CCAGGTGTTC GAGGCCAAGC CGGAGGTGTT CGCGCACAAC
CTGGAGACGG TGCCGCGGAT CTTCAAGCGG ATCCGGCCGG CCTTCCGGTA CGAGCGGTCC
CTGGACGTGA TCAGCCAGGG TCGGGCGGCC GGCATGGTGA CCAAGTCCAA CCTGATCCTG
GGCATGGGCG AGACCCGCGA GGAGATCAGC CAGGCGCTGC AGGACATGCA GCAGGTCGGG
TGCGACCTGG TCACCATCAC CCAGTACCTG CGGCCTACCC CTCGGCACCA TCCGGTGGAG
CGGTGGGTCA AGCCCCAGGA GTTCGTGGAG CTGGCCGAGG AGGCCAAGCA GATCGGCTTC
GCCGGGGTGA TGTCCGGACC ACTGGTCCGG TCCTCCTACC GGGCCGGCAC CCTGTACCGG
CAGGGTGCCG AGGCGCGGGC GGCGCGGGAG CGGGCCCAGG AGCCCGCCCC GGCGACCCCC
TGA
|
|---|
| Protein sequence | MTLAPEGRKL LRLEVRNAAT PIEKKPEWIK TRLRTGPEFQ QLQSLVKREG LHTVCQEAGC
PNIYECWEDR EATFLIGGDQ CTRRCDFCLI DTGKPGELDR DEPRRVAESI RSMDLRYATI
TGVTRDDLPD EGAWLYAETI RQVHAQAPQT GVEILTPDFS GHPELLNQVF EAKPEVFAHN
LETVPRIFKR IRPAFRYERS LDVISQGRAA GMVTKSNLIL GMGETREEIS QALQDMQQVG
CDLVTITQYL RPTPRHHPVE RWVKPQEFVE LAEEAKQIGF AGVMSGPLVR SSYRAGTLYR
QGAEARAARE RAQEPAPATP
|
|---|
| |