Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1868 |
Symbol | gcvT |
ID | 8447475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2053146 |
End bp | 2054252 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645040998 |
Product | glycine cleavage system aminomethyltransferase T |
Protein accession | YP_003201246 |
Protein GI | 258652090 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.104311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00306149 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGGAC CGCTGCGTCA CTCGCCCCTC GATGCCCGGC ACCGAGCCCT CGGGGCCACC ATGGGCGAGT TCGGCGGGTG GGACATGCCC ATCTCCTACG CCGGCGCCGG AGTGGTCGCC GAGCACACCG CCGTGCGCAC CGCGGCCGGT GTCTTCGACG TCTCCCACCT GGGCAAGGCC ACGGTCACCG GACCCGGCGC GGCCGCGTTC GTCAACGACT GCCTGTCCAA CGACCTGAAC CGGATCGGCC CGGGACAGGC CCAGTACACG CTGTGCTGCA CCGGCGACGG TGGCGTGCTC GACGACCTGA TCGCCTACCT GGTCTCGCCC GACGAGGTGT TCCTGATCCC GAACGCGGCC AACACTGCCG CGGTGGTCGC CGCGCTGGCC GCGGCCGCGC CGCCGCAGGT GCAGATCGTC GACCGGCACA CCGATTTCGC GGTGCTGGCG GTGCAGGGAC CGGCCTCGGC CGAGGTGCTG GCGGCGGTCG GGCTGCCCAC CGAGCTGGAC TACATGTCCT GGCGGGACGG CGTCCTGGAC GGCGCGCCGG TCCGCGTGTG CCGCACCGGC TACACCGGCG AACACGGCTA CGAACTCGTC CCCGCCTGGG CCGACGCCGA GAAGGTCTGG GACGCGATCG TGCACGAGGC CGGACGCCGC GGCGGCCGAC CGGCCGGCCT GGGCGCGCGG GACACCCTGC GCACCGAGAT GGGCTACGCC CTGCACGGGC AGGACCTGGG CCCGCAGATC ACCCCGGTGC AGGCCCGGGT GGGGTGGGCG GTGGGCTGGC GCAAGCCGAG CTTCTTCGGG CGGGACGCGC TGCTCACCGA ACGGGAGAAC GGGCCGCACC GCGTGGCGTG GGGCCTGCTG GCTCTGGACC GCGGCGTACT GCGCGGCCAC CTGTCGGTCG TGGACGCGGC CGGCACCACC ATCGGCGAGA CGACCTCGGG CACCTTCTCA CCGACCCTCG GGGTGGGGAT CGCGCTGGCC CTGATCGACA CCGTGGCCGG CGTCGTGGAG GGCGACGAGA TCGCCGTCGA CGTGCGCGGC CGGCGGATGC GGGTCCGGGT GGTCAAGCCC CCGTTCGTGC CCTCCCACGT GCGCTGA
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Protein sequence | MPGPLRHSPL DARHRALGAT MGEFGGWDMP ISYAGAGVVA EHTAVRTAAG VFDVSHLGKA TVTGPGAAAF VNDCLSNDLN RIGPGQAQYT LCCTGDGGVL DDLIAYLVSP DEVFLIPNAA NTAAVVAALA AAAPPQVQIV DRHTDFAVLA VQGPASAEVL AAVGLPTELD YMSWRDGVLD GAPVRVCRTG YTGEHGYELV PAWADAEKVW DAIVHEAGRR GGRPAGLGAR DTLRTEMGYA LHGQDLGPQI TPVQARVGWA VGWRKPSFFG RDALLTEREN GPHRVAWGLL ALDRGVLRGH LSVVDAAGTT IGETTSGTFS PTLGVGIALA LIDTVAGVVE GDEIAVDVRG RRMRVRVVKP PFVPSHVR
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