| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1748 |
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| Symbol | |
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| ID | 8447350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1911412 |
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| End bp | 1915455 |
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| Gene Length | 4044 bp |
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| Protein Length | 1347 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645040874 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003201127 |
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| Protein GI | 258651971 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3827] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.207372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0116173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGAC GAACCACCGG TGATGGCCCC ACCGCCCTGC GCGCCCTCGC CCGCCGCGGC
CTGCTCAGCC TGGTCGCGGC CTCCACCGCC GCCACCATCG CACTGGTGCC GGTGGCCCCG
GCGACGGCCA CGCCCGTCAT CGTGGTCCCG GCGGCTGCGG TCGCGTCGGC GCCGATCGCC
GATCCGGGGG CCGCCGCGCC CTCGGCGGCC CCAACCACCG ACCCGGCCCC CACGCCCGCC
CCGACCCCGG CCTCGACGCC CGCGCCGGCC TCGACGCCCG CGCCGGCCCC GACACCCGCG
CCGGCGCCGG CCGCGGCGGT GGCTCCGGCT CCCGCCGCCG CCACGGCCAC GACGACCGAC
CCGGCCCCGA CCGGCAGCCC GGCTCCGGCT CCGGCCGCGG GGTCGCCGTC CGCCTCCACC
CCCGCCTCCA CCGCACCCTC GACAGTGGTT CCCAGCAGCA CCTTCTCGCT GTCCCCGGCG
GCCCGGTCGT TCCTGTCCGC CCTGAACCTG AACCTGGGAT CCGGGCCGGT CACCGGCACC
CTGGACGGCT CGGTGCTCAC CGTCGCCGTC GGCGCCCCCG CCGTGGCGTT CCCGCTGCCC
ACCCCCGGCC AGACGGTCTC CTTCACCGGC GCCACCTTGA CCATCGACGA GTCCACCCGG
ACGCTGACCC TCACCGCCGC GGTCACGACC GGCAACGGTC TCGGCGGTTC GCTGTCGGTG
AGCATCGCCA ACGCCGATGC CACCGATCTG ACCGGAGCCG ACCTGACCGC CACCCTCGAC
ATCACCGGGA TCTCCGTGCT GGGGACCACG GTGGAGGTCT CCGGCTCGCT GTCCGCCACC
GGCGGCCGGC TCGCCGCCTC CCTGACCGGC AGGCTGAGCA GCGACGGCGT CGTCGCCGAC
GGGGTGCTGA CCGTCAAGTC CGGGAGCACC ATCACCCTGG CCACCGACAC CGGCCTGAGC
GTCAACGGCA CCGCCGTCCT CGGTTCCGGC CCGACGGCTT TCACCGTGAT CGTGTCCGGT
GCGATCAAGG ACGGCCGGAA CTGGTCGCTG AGCGTGGACA ACACCGCCGA GACGCCACAG
TTCAGCCCGG TCGACGGCCT GAGCATCAGT CCGGCGTTCG CCGGAACGAT CACCGACGCC
AACGGGACCG TCACCTTCGA TGTCGCCGGG GACGACACCG GGAGCTGGCA AACCGGCCCG
GCCACGTTGT CCCTGACGCA CGTGGAGGTG TCCAACGCCG CTCCCCGGGA CGGATTGGCC
TGTCCCGCGG TCGATCCCGG CCAGGTCTGG TTCGACATCC AGGGCGGCGT GGCCGATCCG
GCGGCCGGGA TCGCCGGTTC CGCGCAGGCC TGCGTGGTAC CGGCGGCCAA GGCGTTCCAG
ATCACCGCGA GTGCGCCGAG CATCACCCTG CCCAACGCGG CCCACTTCTC GCTGGACCAG
CCATCGGTGT CGATCACCGG CAGCGGCGTC GGGACGGCGC AGGCCAAGGT CGCGGTGTCG
GCCGCCGCCA CCCTGACGGT GGCGCCGGAC GCCGACCACA CGGTCCACAC TCCGGTCACC
CTGAGTTTCG CCGACGATGG CAGCTTCACC GCTTCGGCCG GGATCGATCT AGGCGCGCTC
GGCGTCGGCT CGGGCCAGGG CACCCTGGTG CTGGCCAGCA AGCAGATCGC CCAGTTCGAC
CCGACGACCG TGGGGGCGAC CGGTCAAAAG TTCGATCTGC CGGCCGGCGT CACGCTGCTG
TTCGCCTACC AGCCCTCGGG TGCGGTGAGC GCGGCGCTCA AGAACCTGCA GTTGCCCGCC
CCGAAATCCA TCGCCGCCCG GGCCACCCTG TCCGACAACG GGTTCGAGGC GACCGCTCAG
CTGCAGTTCG GCGACCGGGA CCAGGGCGCC AAGCTGTTCG CGCAGAACAC CCCCGGTGGC
GCCGCGGCCT ACATCAACTC CCTGGGTCTG GATTTCCAAC TGGGTTCGGC CAGCGGCACG
GTGACCGTGT CCGGGTCGGC CTTCCTCGTG TTGTCCAAGC TGTATGCCAG CGGCACGGCC
TCCCGGGTCC AGGTCACGCT CGGCGGCAGC CTGGGGGTCA GCGCGCAGGG GGCGGTGTCG
GTCTCCTTGC AGTTCGACAT CAAGGGTCTG GGCGGGCCGT GGACCGACGC GTTCGGCATC
CCCGGTCTGT CGGTCAGTGA GGTCGCCGGC CGGATCGGGG TGAAGGACAG TCCGGAAACC
GCCGGCATCC CCCTACCCAC GCTGGCCTTC AAGGTCGACA ACGTGCAGCT GCCCAAGGCC
TGGAACGATG CCATCGGCAT CCAGGCCGGC GCCACCACCT CGTTGAATCT GGTGCTGGAC
GTGAACAACC CGGTGCTCGG CTTCTCGATC GCCGGCCAGA CCCCGGATGC GGTCGCGCTC
AAGCCCTTCA CCATCATCAA GTCGGTGGCC GGGAAGTCGA TCCCGTCGTC CTTGCCGGAT
TCGGTGCAGG TCAAGACCGC GCAGCTGCTG TTCGCCCCGC TGGGCGGCAC CGACGCCGCG
GGCAAGGCGA TCAACCCCGG GGCGACCCTG GTCTTCGACA GCGCCGTGGC CGGTGTACCC
GTGCACGTGG ATGGCAACGT CGCCGTGCTG CCTTACCCGA GCCTGACCGC CGACGCGAGC
GTCGGCAACT TCGCGGTCGG GCCGGTCACC CTGGCCAACA CCGACCTGAA GATCACGCTG
TCCGCGGATC CGTCGAACCC GCAGGCGGAC TTCAGCTTCC ACGGCGGATT CACCGACAAG
ACCAGCGGCA TCTCGTTCCT GGCCGGCATC GACGAGGGCG CCTCCGCCTC CCTGGCCAGC
GCCGCGGTGT CGCTGCACAT CGCCGGTGGC CAGCCGCAGT ACCTGCAGGC GGCGGCGGAC
CTGACCGGTT CGGTCTCGAT CTCGCCCAGG GACGGCAGCG TCTCCTTTGC GGCCTCGGGC
AATGCCGCGG TCGCGGTGAA CGGGCTGAAC CTGGCGTCCG TGCCGTTCAG CTACTCGACC
ACCAGCGGCG CGCTCTGGCA GCAGCTGCAG GGCAGCGCGG GCCAGGTGGC CCAGGCGTTC
AAGAGCGCCT ACGGATGGAC CGATGCCCAG GCCGCGGCCG CGCTGAACAC CCTGCGGGCC
ACGCCGGCCC AGATTGCCGG GGCCCTGCAA TCGGCCTACG GCGACGGCTC TGACGCGGTG
ATGAAGGTCC TGCTCAAGAC CGGATTCAGC GTCGACACCA GCATCGCGAC GGTGAAGTCG
ATCCTCGGGG CGGCGGACAA CCAGATTGCC AGCACCCTTG CTCAGCTGGG CTACCAGCAA
ACCCAGATCG CGACCCTGCT GAACCGCTTC TACGGCGACG CCGACGCCCG GATCGCTTCC
GTCCTGCTCG GTCTGGGCAA CACCGCGACC AGCGTCGCCG GGACCCTGCA CACCGTGTTC
GGTGACACCG ACCGGCAGGT CGCCGTGGCC TTCCAGCAGA TCGGGGTGCC CGCCCAGACG
ATCGAGGCCG CACTGACCAA TGCCTTCGGC GACGGGCAGG CGGCGATCTA CAACCTGATG
ACCTCGATCG GCTCCGCCGG CACCGGCACC CTGGACGCGC TGGCCGGGGT GTTCAACTCC
GGGGCCTACT CGCCGTCGGC GCACCCGTGG TGGTCGGTGC CGCTGCTGTG GGACGTGTCC
AACGCCAGCA CCGCCGAGGG TGCGCCGGTC CTGCAGTGGA GCTGGAACGG CGGGCACAAC
CAGCAGTGGT ACGTGCTGCC GACCGACGGC GGGTTCGCCG AGCTGGTCAA CCGCAACAGC
GGCAAGTGCC TGGCCGCGCC GGGCTACAAC GCAGGCCAGC AACTCATCCA GGTGGCCTGC
ACCGGCAACC CGGGGCAGCA GTGGTACCTG GGCGTGTACC CCGGGCAGAG CCTGACCGGC
CAGACCAAGA CCGTCTGGAA CCGCGCGACC GGGCTGTACG CGGACGTCAG TGGGGCCAGC
ACCGCGGCCG GTGCGGCCAT CGACCAGTGG TACTACAACG GCAACTGGAA CCAGCAGTGG
TACTTCGGTC CCGCGGTCGG ATGA
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| Protein sequence | MSRRTTGDGP TALRALARRG LLSLVAASTA ATIALVPVAP ATATPVIVVP AAAVASAPIA
DPGAAAPSAA PTTDPAPTPA PTPASTPAPA STPAPAPTPA PAPAAAVAPA PAAATATTTD
PAPTGSPAPA PAAGSPSAST PASTAPSTVV PSSTFSLSPA ARSFLSALNL NLGSGPVTGT
LDGSVLTVAV GAPAVAFPLP TPGQTVSFTG ATLTIDESTR TLTLTAAVTT GNGLGGSLSV
SIANADATDL TGADLTATLD ITGISVLGTT VEVSGSLSAT GGRLAASLTG RLSSDGVVAD
GVLTVKSGST ITLATDTGLS VNGTAVLGSG PTAFTVIVSG AIKDGRNWSL SVDNTAETPQ
FSPVDGLSIS PAFAGTITDA NGTVTFDVAG DDTGSWQTGP ATLSLTHVEV SNAAPRDGLA
CPAVDPGQVW FDIQGGVADP AAGIAGSAQA CVVPAAKAFQ ITASAPSITL PNAAHFSLDQ
PSVSITGSGV GTAQAKVAVS AAATLTVAPD ADHTVHTPVT LSFADDGSFT ASAGIDLGAL
GVGSGQGTLV LASKQIAQFD PTTVGATGQK FDLPAGVTLL FAYQPSGAVS AALKNLQLPA
PKSIAARATL SDNGFEATAQ LQFGDRDQGA KLFAQNTPGG AAAYINSLGL DFQLGSASGT
VTVSGSAFLV LSKLYASGTA SRVQVTLGGS LGVSAQGAVS VSLQFDIKGL GGPWTDAFGI
PGLSVSEVAG RIGVKDSPET AGIPLPTLAF KVDNVQLPKA WNDAIGIQAG ATTSLNLVLD
VNNPVLGFSI AGQTPDAVAL KPFTIIKSVA GKSIPSSLPD SVQVKTAQLL FAPLGGTDAA
GKAINPGATL VFDSAVAGVP VHVDGNVAVL PYPSLTADAS VGNFAVGPVT LANTDLKITL
SADPSNPQAD FSFHGGFTDK TSGISFLAGI DEGASASLAS AAVSLHIAGG QPQYLQAAAD
LTGSVSISPR DGSVSFAASG NAAVAVNGLN LASVPFSYST TSGALWQQLQ GSAGQVAQAF
KSAYGWTDAQ AAAALNTLRA TPAQIAGALQ SAYGDGSDAV MKVLLKTGFS VDTSIATVKS
ILGAADNQIA STLAQLGYQQ TQIATLLNRF YGDADARIAS VLLGLGNTAT SVAGTLHTVF
GDTDRQVAVA FQQIGVPAQT IEAALTNAFG DGQAAIYNLM TSIGSAGTGT LDALAGVFNS
GAYSPSAHPW WSVPLLWDVS NASTAEGAPV LQWSWNGGHN QQWYVLPTDG GFAELVNRNS
GKCLAAPGYN AGQQLIQVAC TGNPGQQWYL GVYPGQSLTG QTKTVWNRAT GLYADVSGAS
TAAGAAIDQW YYNGNWNQQW YFGPAVG
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