Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1723 |
Symbol | |
ID | 8447325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1886630 |
End bp | 1887241 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645040849 |
Product | protein of unknown function UPF0126 |
Protein accession | YP_003201102 |
Protein GI | 258651946 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.000275275 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.128293 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGCGG GACGACTGTT GACGGCCGCC GACCTGGCGG CCACCTGCCT GTTCGCCATC GAAGGGGCGA TCGTCGCCCG CTACGCCGAC CTGGACGTCT TCGGCATCCT GGTGATCGGC TTCGTCAGCG CCCTGGTCGG CGGGATCATC CGGGACGTGC TGATCGGCTA CACCCCGCCG GCCTCCCTGC GCAGCGCGAT CTACCCGCTG ACCGCCTTCG TCGGGGCGGG CGCCGTGATC GCCCTGGACC AGTTCGTCGA GCGGGTGCCG GTGGCCCTGT TGCAGTTCAC CGACGCCGCC GGGCTGGCCC TGTTCGCCGT CGTCGGGGCG ACCAAGGCGG TCGACTTCAA GATCAACGGC TTCGTGGCCA CCCTGCTCGG CGCGGTCTCC GCGGTCGGCG GCGGGGTGGT GCGGGACCTG CTGCTCAACG TGGTGCCGGG CATCCTGCGC CAGGACATCT ACGCGGTCGC CGCCCTGGCC GGAGCCGCGG TGACCGTACT GGCCCTGCGC TGGCGCATGC CCCGCGCGGC CGCCATGAGC ATCGGCTTGG CCGTCTGTTT CCTGCTGCGC ATCGTCAGCG TCTGGCAGGG CTGGCACCTG CCCCGGCTGT GA
|
Protein sequence | MTAGRLLTAA DLAATCLFAI EGAIVARYAD LDVFGILVIG FVSALVGGII RDVLIGYTPP ASLRSAIYPL TAFVGAGAVI ALDQFVERVP VALLQFTDAA GLALFAVVGA TKAVDFKING FVATLLGAVS AVGGGVVRDL LLNVVPGILR QDIYAVAALA GAAVTVLALR WRMPRAAAMS IGLAVCFLLR IVSVWQGWHL PRL
|
| |