Gene Namu_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1654 
Symbol 
ID8447253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1820316 
End bp1821539 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content74% 
IMG OID645040777 
ProductDNA polymerase IV 
Protein accessionYP_003201033 
Protein GI258651877 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.263851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0394567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGTGC GCATCAGCGG GACCAGGACG GACGCGTCGA TCCTGCACGC CGACCTGGAC 
GCCTTCTTCG CCTCGGTCGA GCAGCGCGAC AACCCCACGC TGCAGGGTCG CCCGGTCATC
GTCGGCGGCG GCGTCGTGCT CGCCGCCAGT TACGAGGCCA AGGCGATGGG GGTACGGACC
GCGATGGGCG GCCGGCAGGC CCTGGCCCTG TGTCCGGACG CGGTCGTCGT CGAGCCCCGG
TTCAAGGCCT ACACCCGGGC CAGCCACGAC GTGTTCGAGG TGTTCCGGGA CACGACGCCG
CTGGTCGAGG GCCTGTCCAT CGACGAGGCG TTCCTGGACG TCGGCGGGCT GCGCCGGGTC
TCCGGCGAGC CGGCGCAGAT CGCCGCCCGG CTGCGGGCCG CCGTGCTCGA GCGGGTCGGC
CTGAAGATCA CCGTCGGCGT CGCCCGCACC AAGTTCCTGG CCAAGGTGGC CAGCGGGGTG
GCCAAGCCGG ACGGGCTGCT GGTGGTCGAA CCGGACCGGG AGCTGGAGTT CCTGCATCCC
TTGCCGGTGC AGCGGTTGTG GGGCGTCGGC CCCAAGACCA CGGCCAAGCT GCACGCCCTG
GGCGTGACCA CGGTGGGTCA GGTCGCCGGG CTGGACGAGG CCACCCTGCT CACCGCGCTG
GGTCAGGGGT CGGGCCGGCA CCTGCACGCG CTGGCGCACA ATCACGACCC GCGCGCCGTC
CAGGTCGGCA AGCGGCGGGG GTCGATCGGC TCGCAGCACG CGATGGGCCG GGGCCAGCAC
TCGCTGGCCG AGATCGACGC GATCGTCATC GCGCTGGTCG AGCGGGTCGG CGGCCGGATG
CGCAAGGCCG GCCGCGAGGG CCGCACGGTC ATGCTGCGCC TGCGCTTCGA CGACTTCACC
CGGGCCAGCC GGTCCCACAC CTTGGCCCGG CCCACGGCGC AGACCCCGGT GATCCTGGAG
GCGGTACGGG ACCTGGTGGC CACGGCCCGG CCGCTGATCC GGGACCGCGG CGGGCTCACC
TTGCTCGGCA TCGCGGTGGG CAACCTGGAC GACGAGGACG GTCAGCTGGA GTTGCCGTTC
GGGGCCCGGT CGGCCCCGGT CCGGGACGCC GCCCTGGACA CGGCGATGGA CGGCATCCGG
GAACGTTTCG GCGCCGCCTC GCTGACCCGG GGCGTGCTGG TCGGCCGCGA GCAGCGGGCC
GCCATGCCGA TCCTGCCCGA CTGA
 
Protein sequence
MFVRISGTRT DASILHADLD AFFASVEQRD NPTLQGRPVI VGGGVVLAAS YEAKAMGVRT 
AMGGRQALAL CPDAVVVEPR FKAYTRASHD VFEVFRDTTP LVEGLSIDEA FLDVGGLRRV
SGEPAQIAAR LRAAVLERVG LKITVGVART KFLAKVASGV AKPDGLLVVE PDRELEFLHP
LPVQRLWGVG PKTTAKLHAL GVTTVGQVAG LDEATLLTAL GQGSGRHLHA LAHNHDPRAV
QVGKRRGSIG SQHAMGRGQH SLAEIDAIVI ALVERVGGRM RKAGREGRTV MLRLRFDDFT
RASRSHTLAR PTAQTPVILE AVRDLVATAR PLIRDRGGLT LLGIAVGNLD DEDGQLELPF
GARSAPVRDA ALDTAMDGIR ERFGAASLTR GVLVGREQRA AMPILPD