Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1426 |
Symbol | |
ID | 8447022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1574622 |
End bp | 1575236 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645040557 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003200816 |
Protein GI | 258651660 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.0803354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAG TCACCGATGC GCATCGCGCC GCCCGCCGCG ACCAGATCCT GCAGGCCGCG TGGGTGTGTT TCGCCCGCAA GGGCTTTCAC GCCACGTCGA TGGCCGACGT GATCGGCGAG GCCGGCCTGT CCGCGGGCGC CGTCTACCTC TACTTCCGTT CGAAGGAGGA GATCATCGTC GCGGTCGCCG GCGAGGTGTT CGGCGGCATC GAGCACCGGC TCAGCGCCTA CGTCGCGCAG GACCCGCCGC CGAGCCCGTC CGATCTGATC GACTTCCTCG CCGAGCAACC GGTCATCGCC CGGGCCGCCG CCCCCGGGGA TCTGTTCTCA CTCCTGCTCA CCGTCTGGGC CGAGGCGTCC CGGCACCCGA CGGTGAACGA GGTCGCTCGC ACGCTGTTGG ACGAACTGCG CACCGTGCTG GGCCAGGCGA TGCACCGCTG GCTGGACGCG GGGAACTCGC TGGCGCTCGC GCCCGAAGCC CTGGCGCCGG TGATGATGTC GGTGGTGCAG GGCATGGTGA TGCAGCAGGC GATCGACGGG CAGCCCCCGT TCGAGCAGTA CCGGGCCGCC GTTCGCGCCC TGGTCGAGGC GGTCGAACGG CCCGGCCCTC AGTAG
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Protein sequence | MPKVTDAHRA ARRDQILQAA WVCFARKGFH ATSMADVIGE AGLSAGAVYL YFRSKEEIIV AVAGEVFGGI EHRLSAYVAQ DPPPSPSDLI DFLAEQPVIA RAAAPGDLFS LLLTVWAEAS RHPTVNEVAR TLLDELRTVL GQAMHRWLDA GNSLALAPEA LAPVMMSVVQ GMVMQQAIDG QPPFEQYRAA VRALVEAVER PGPQ
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