Gene Namu_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1271 
Symbol 
ID8446867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1395753 
End bp1396379 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content72% 
IMG OID645040405 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_003200664 
Protein GI258651508 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.246325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.912887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCCAG TCGAGAACCC CAAGAACGTG GTCGTCCTCG CGTCCGGCTC CGGAACGCTG 
CTGCAGGCGC TGCTGGATGC GCCCGATCCC AAGCCGTTCC GGGTGGCCGC GGTCGGTTCC
GACCGCTCGT CCTGCGTGGC CCTGGACCGG GCCGCCGGGG CCGGCGTGCC CACCTTCAGC
TGCCGGGTCG CCGACCATCC CGACCGGCCG GCCTGGAACG CCGCACTGGC CGCCGCGGTG
GCCACCTACG CGCCGGACCT GATCGTGCTG GCCGGCTTCA TGAAGCTGCT CGCGCCGACG
TTCCTTGACG CCTTCGACGG CGCCTTCACC AGCAAGGTGA TCAACGCGCA CCCGTCGCTG
CTGCCGGCGT TCCCGGGCAT GCACGCCCCG GCCGACGCGC TGGCCCACGG GGTCAAGCTG
ACCGGCTGCA CCGTCTTCCT GGTGGACGCC GGGGTGGACG CCGGCCCGAT CGTCGCGCAA
CGGGCGGTGC CGGTGGCCGA CGACGACGAC GCGGACACCC TGCACGAACG GATCAAGGTC
GTCGAGCGAG CGCTGCTGGT CGACGTGGTG ACCGCCCTGA CGGCGGCGCC CTACACGGTG
AACGGACGAA AGGTGATGCT GGGATGA
 
Protein sequence
MPPVENPKNV VVLASGSGTL LQALLDAPDP KPFRVAAVGS DRSSCVALDR AAGAGVPTFS 
CRVADHPDRP AWNAALAAAV ATYAPDLIVL AGFMKLLAPT FLDAFDGAFT SKVINAHPSL
LPAFPGMHAP ADALAHGVKL TGCTVFLVDA GVDAGPIVAQ RAVPVADDDD ADTLHERIKV
VERALLVDVV TALTAAPYTV NGRKVMLG