Gene Namu_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1244 
Symbol 
ID8446840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1364134 
End bp1364418 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content67% 
IMG OID645040378 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_003200637 
Protein GI258651481 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.107639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.587434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTGA CGGTGATCGT TGCCTACGAC ATCAGCGAGG ACAACCGGCG GGCCCGCCTG 
GCCGCCGTGC TGCAGGCGTA CGGCGATCGA ATACAGAAGA GCGTCTTCGT GCTGTCGGCA
GACCAGCCGT TGATCGATGA CCTGCACCGG CGCGCCCGGG ACATCATCGA CCTGGACCGG
GACTCGGTCT ACTTCTTCCG GCAGTGCGCG CCGTGCTGGG AGTCCGTGGG AGTGGTGGGC
CAGGCCACCG TGGCGGAACC GCAGCGATAC TGGGCGGTGT TCTGA
 
Protein sequence
MALTVIVAYD ISEDNRRARL AAVLQAYGDR IQKSVFVLSA DQPLIDDLHR RARDIIDLDR 
DSVYFFRQCA PCWESVGVVG QATVAEPQRY WAVF